Hi Saloni Does that directory exist? What is your SUBJECTS_DIR set to? And have you run recon-all -qcache on all your subjects?
cheers Bruce On Mon, 26 May 2014, Saloni Sharma wrote: > Dear Freesurfers, > > So I have followed all the instructions given on your website in order to > use qdec. When i analyse the images only using a file group.levels that > defines the two groups I'm comparing the analysis runs fine and gives me > results, but when I add gender, for instance, as a discrete factor, it loads > the data successfully but when I click analyse it shows the following error: > > Error in Analyze: Couldn't open > file/tallaght-disk4/IMAGEN/Saloni_data/freesurfer_output/000072882642/surf/lh.t > hickness.fwhm10.fsaverage.mgh > > Please guide me as to what is going wrong and what I can do to fix it. I > would appreciate a quick response as my thesis submission is due in two > weeks and I cannot proceed until this problem is sorted. > > Thanks and regards, > Saloni > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
