Hi everyone, To put things into context, I am trying to follow the four step methodology outlined in this paper (Cohen-Adad, 2013) http://www.sciencedirect.com/science/article/pii/S1053811913000700
I have already performed recon-all on MPRAGE data. I have also carried out the following steps: 1) Reconstruct cortical surface 2) Register T1 to the surface 3) Sample T1 at a given cortical depth 4) Register surface to fsaverage I have now been told to use the T2* information from the fourth echo of separately acquired T2* weighted data and to 'overlay' (I'm not sure if this is the correct usage of this technical term) it on the surfaces produced (as above) of the MPRAGE data. I realize that I can't perform recon-all on this T2* weighted data. I am assuming that I need to carry out steps similar to 1)-4) on this new data, but I'm not sure. Would you have any guidance on how to go about this? Any help would be appreciated! Thank you! _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
