yes, but you might want to change the name of the stats file so that you don't overwrite the one that is there doug
On 05/18/2012 11:39 AM, Inês Violante wrote: > Thank you. > > I've tried this command: > > mris_anatomical_stats -f AC/stats/lh.aparc.stats -b -a > AC/label/lh.aparc.annot -c ./aparc.annot.ctab AC lh pial > > Would this be appropriate? > > > ines > > On Fri, May 18, 2012 at 4:32 PM, Douglas N Greve > <gr...@nmr.mgh.harvard.edu> wrote: >> And you can get the full command line from the >> $subject/scripts/recon-all.log file >> doug >> >> On 05/18/2012 10:41 AM, Michael Harms wrote: >>> The last argument of mris_anatomical_stats allows you to specify the >>> surface to use (pial in your case) >>> >>> cheers, >>> -MH >>> >>> >>> NAME >>> mris_anatomical_stats >>> >>> SYNOPSIS >>> mris_anatomical_stats [options]<subjectname> <hemi> >>> [<surfacename>] >>> >>> >>> On Fri, 2012-05-18 at 15:18 +0100, Inês Violante wrote: >>>> Hi, >>>> >>>> I need to know the surface area of the structures in the aparc file >>>> but I want to obtain this measurement from the pial surface and not >>>> the white matter surface. >>>> How can I do that? >>>> >>>> Thank you a lot for your help. >>>> >>>> ines >>>> _______________________________________________ >>>> Freesurfer mailing list >>>> Freesurfer@nmr.mgh.harvard.edu >>>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>>> >>>> >>>> The information in this e-mail is intended only for the person to whom it >>>> is >>>> addressed. If you believe this e-mail was sent to you in error and the >>>> e-mail >>>> contains patient information, please contact the Partners Compliance >>>> HelpLine at >>>> http://www.partners.org/complianceline . If the e-mail was sent to you in >>>> error >>>> but does not contain patient information, please contact the sender and >>>> properly >>>> dispose of the e-mail. >>> _______________________________________________ >>> Freesurfer mailing list >>> Freesurfer@nmr.mgh.harvard.edu >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >> -- >> Douglas N. Greve, Ph.D. >> MGH-NMR Center >> gr...@nmr.mgh.harvard.edu >> Phone Number: 617-724-2358 >> Fax: 617-726-7422 >> >> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >> FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/facility/filedrop/index.html _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
