Hello, Anyone have a chance to look at this? Should we just forget about trying to get an accurate lhCorticalWhiteMatterVol value for this subject?
thanks, -MH On Tue, 2012-02-21 at 15:35 -0600, Michael Harms wrote: > Hi guys, > > We have a subject processed with FS v5.1 in which > lhCorticalWhiteMatterVol in aseg.stats is much too low -- only 33781 > mm^3. From what I see, the aseg.mgz looks fine. 'mris_volume lh.white' > returns 287261 and running mri_segstats without the --excl-ctxgmwm > option returns a Left-Cerebral-White-Matter volume of 245169. > 'mris_euler_number' indicates no problems with lh.white. > > Running 'mris_wm_volume' on its own generates the same value of 33781. > I also tried running 'mris_wm_volume' with the -v option to see if any > interesting messages popped up, but got the message "unknown option -v". > > Any idea what is going wrong here? So you can see for yourself, I went > ahead and uploaded the subject's processed data to your FTP server > (110107_L206.tgz) > > thanks, > -MH > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
