Hi guys, We have a subject processed with FS v5.1 in which lhCorticalWhiteMatterVol in aseg.stats is much too low -- only 33781 mm^3. From what I see, the aseg.mgz looks fine. 'mris_volume lh.white' returns 287261 and running mri_segstats without the --excl-ctxgmwm option returns a Left-Cerebral-White-Matter volume of 245169. 'mris_euler_number' indicates no problems with lh.white.
Running 'mris_wm_volume' on its own generates the same value of 33781. I also tried running 'mris_wm_volume' with the -v option to see if any interesting messages popped up, but got the message "unknown option -v". Any idea what is going wrong here? So you can see for yourself, I went ahead and uploaded the subject's processed data to your FTP server (110107_L206.tgz) thanks, -MH -- Michael Harms, Ph.D. -------------------------------------------------------------------- Conte Center for the Neuroscience of Mental Disorders Washington University School of Medicine Department of Psychiatry, Box 8134 Renard Hospital, Room 6604 Tel: 314-747-6173 660 South Euclid Ave. Fax: 314-747-2182 St. Louis, MO 63110 Email: mha...@wustl.edu -------------------------------------------------------------------- _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
