Hi Ivan
you can convert any volume to any supported output type using
mri_convert. It will figure out the format from the extension, so:
mri_convert aseg.mgz aseg.nii.gz
or
mri_convert aseg.mgz aseg.nii
should do the trick
cheers
Bruce
On Mon,
30 Jan 2012, Fellhauer, Iven wrote:
Dear all,
I run recon-all with the ?autorecon1 and ?autorecon2 options. Now I want to
store the segmentation results in a spm like way. One nifti file for each
matter. Can I do this with freesurfer? And how can I do this with
freesurfer?
Best regards,
Iven Fellhauer
----------------------------------------------------------------
Universitätsklinikum Heidelberg
Zentrum für Psychosoziale Medizin
Klinik für Allgemeine Psychiatrie
Sektion für Gerontopsychiatrie
Voßstr. 4
69115 Heidelberg
Tel.: +49 (0) 6221 - 56 7578
Email: iven.fellha...@med.uni-heidelberg.de
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.