Hi Nick, On Tuesday 12 May 2009 15:39:47 Nick Schmansky wrote: > Martin, > > That etiv number seems high. Does the -tal-check stage pass? did you > rerun the -segstats stage? that calculates etiv.
The data were first pushed through the whole FS pipeline in 2006. As I look at the recon-all.log, at that time there wasn't -tal-check. Then recently I reconstructed the data once again with FS-4.3.0, but ran only autorecon2 and autorecon3, to keep the possible brainmask edits. However, analysis of several subject failed to complete and crashed during mris_volmask, which is just after -segstats stage. So the eTIV should have been recalculated. Thanks for suggestions, Martin _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
