Thanks Nick!
I've another question for you: 
I read that there is a version  of freesurfer that works better with the SPGRs. 
can I download it?if yes how an I do it?
thanks
valentina
 
Nick: have you posted the latest rev? If not, you can 
>>> try downloading the dev version and see if it works better for you.


________________________________

From: Nick Schmansky [mailto:[EMAIL PROTECTED]
Sent: Sat 4/8/2006 8:22 PM
To: Durastanti, Valentina (NIH/NINDS) [F]
Cc: Bruce Fischl; Julia Hamstra; Freesurfer Mailing List
Subject: Re: [Freesurfer] (no subject)



Use:

  recon-all -s <subj> -skullstrip

Also, recon-all -help will list-out most of the steps which can be run
individually (see section titled STEP-WISE DIRECTIVES).

On Sat, 2006-04-08 at 19:47 -0400, Durastanti, Valentina (NIH/NINDS) [F]
wrote:
>
> Hi,
> I'm using Freesurfer and I'd like to run the autorecon1 just for the
> skull stripping (without intensity and spatial normalization). Is there
> a command just to do that?
>
> Thanks
> valentina
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>



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