Use: recon-all -s <subj> -skullstrip
Also, recon-all -help will list-out most of the steps which can be run individually (see section titled STEP-WISE DIRECTIVES). On Sat, 2006-04-08 at 19:47 -0400, Durastanti, Valentina (NIH/NINDS) [F] wrote: > > Hi, > I'm using Freesurfer and I'd like to run the autorecon1 just for the > skull stripping (without intensity and spatial normalization). Is there > a command just to do that? > > Thanks > valentina > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
