Dear Nick, I tried to run recon-all -s <subjname> -skullstrip but always came out an error: read error I tried to run recon-all -subjid <subjname> -autorecon1 on the same subjects and it looks good have you any suggestion? Thanks Valentina
-----Original Message----- From: Nick Schmansky [mailto:[EMAIL PROTECTED] Sent: Saturday, April 08, 2006 7:23 PM To: Durastanti, Valentina (NIH/NINDS) [F] Cc: Bruce Fischl; Julia Hamstra; Freesurfer Mailing List Subject: Re: [Freesurfer] (no subject) Use: recon-all -s <subj> -skullstrip Also, recon-all -help will list-out most of the steps which can be run individually (see section titled STEP-WISE DIRECTIVES). On Sat, 2006-04-08 at 19:47 -0400, Durastanti, Valentina (NIH/NINDS) [F] wrote: > > Hi, > I'm using Freesurfer and I'd like to run the autorecon1 just for the > skull stripping (without intensity and spatial normalization). Is there > a command just to do that? > > Thanks > valentina > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
