Hi Aaron,
First, is it something simple and annoying like that your script doesn't
look for an orig.mgz volume (vs. the 'orig' which was standard until fairly
recently)? I have needed to edit my scripts to accommodate for this.
okay!
On Wed, 2 Nov 2005, Goldman, Aaron (NIH/NIMH) wrote:
Hi, I have a script that basically opens up tksurfer and tkmedit for manual
editing, and then runs recon-all stage2 once you're done editing. We recently
tried to run the script on a different computer with the same freesurfer
distribution, and got an error I'm not used to seeing.
It says:
WARNING: Couldn't not load orig volume from /????//surf/../mri/orig.mgz
Talairach coords will be incorrect.
(the '????' was edited in by me)
I was just wondering if this error will create problems, either with correct
manual editing or with running stage2. Thanks,
-Aaron-
Aaron L. Goldman
Post-Bacc IRTA
Genes, Cognition and Psychosis Program, NIMH
Building 10, Room 3C108
Phone: (301) 435-0944
Email: [EMAIL PROTECTED]
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