Hi Nilesh,
On Wed, May 26, 2021 at 03:22:21AM +0530, Nilesh Patra wrote:
> > I've commited some changes to ont-fast5-api. When I try to run any
> > of the scripts installed into the package I get:
> >
> > pkg_resources.DistributionNotFound: The 'progressbar33>=2.3.1'
> > distribution was not found and is required by ont-fast5-api
>
> I fixed this one, and pushed to salsa. It builds, tests run and looks usable.
Thanks for this.
> However, one problem - I'm being verbose so we are in loop:
>
> - This package had .so files vendored in ont_fast5_api/vbz_plugin/* -- this
> is a violation, and hence you repacked it - see this[1]
> - The so files it had, are basically the shared object files that
> libvbz-hdf-plugin vendors, and that was why we packaged it
> - *Now*, we need to somehow tell this package to find the .so files at the
> right location
>
> I did not manage to do that, so I simply ended up symlinking the .so vendored
> by libvbz-hdf-plugin in that directory. This looks like a bad workaround,
> and hence if you have some way to fixup paths, please have a look.
> The bad change I'm talking about is this one[2]
I see what you mean after disabling this hack locally. I need to admit
that I have no idea how to do this properly. I would recommend to ask
at debian-mentors and/or debian-python list whether someone might have a
better understanding where Python is seeking for *.so plugins.
Kind regards
Andreas.
> [1]:
> https://salsa.debian.org/med-team/ont-fast5-api/-/commit/097a79d489062b82c6b3abfc45a970bee59893de
> [2]:
> https://salsa.debian.org/med-team/ont-fast5-api/-/commit/eb74a43929768ab0455f549919df2c5a6607525d
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