Did you do a full autogen / configure / make clean / make all ?
On Mar 1, 2012, at 8:53 AM, Abhinav Sarje wrote: > Thanks Ralph. That did help, but only till the next hurdle. Now the > build fails at the following point with an 'undefined reference': > ----------- > Making all in tools/ompi_info > make[2]: Entering directory > `/global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi/tools/ompi_info' > CC ompi_info.o > CC output.o > CC param.o > CC components.o > CC version.o > CCLD ompi_info > ../../../ompi/.libs/libmpi.so: undefined reference to `opal_atomic_swap_64' > make[2]: *** [ompi_info] Error 2 > make[2]: Leaving directory > `/global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi/tools/ompi_info' > make[1]: *** [all-recursive] Error 1 > make[1]: Leaving directory > `/global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi' > make: *** [all-recursive] Error 1 > ----------- > > > > > > > On Thu, Mar 1, 2012 at 5:25 PM, Ralph Castain <r...@open-mpi.org> wrote: >> You need to update your source code - this was identified and fixed on Wed. >> Unfortunately, our trunk is a developer's environment. While we try hard to >> keep it fully functional, bugs do occasionally work their way into the code. >> >> On Mar 1, 2012, at 1:37 AM, Abhinav Sarje wrote: >> >>> Hi Nathan, >>> >>> I tried building on an internal login node, and it did not fail at the >>> previous point. But, after compiling for a very long time, it failed >>> while building libmpi.la, with a multiple definition error: >>> ---------- >>> ... >>> CC mpiext/mpiext.lo >>> CC mpi/f77/base/mpi_f77_base_libmpi_f77_base_la-attr_fn_f.lo >>> CC mpi/f77/base/mpi_f77_base_libmpi_f77_base_la-conversion_fn_null_f.lo >>> CC mpi/f77/base/mpi_f77_base_libmpi_f77_base_la-f90_accessors.lo >>> CC mpi/f77/base/mpi_f77_base_libmpi_f77_base_la-strings.lo >>> CC mpi/f77/base/mpi_f77_base_libmpi_f77_base_la-test_constants_f.lo >>> CCLD mpi/f77/base/libmpi_f77_base.la >>> CCLD libmpi.la >>> mca/fcoll/dynamic/.libs/libmca_fcoll_dynamic.a(fcoll_dynamic_file_write_all.o): >>> In function `local_heap_sort': >>> /global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi/mca/fcoll/dynamic/../../../../../ompi/mca/fcoll/dynamic/fcoll_dynamic_file_write_all.c:1111: >>> multiple definition of `local_heap_sort' >>> mca/fcoll/static/.libs/libmca_fcoll_static.a(fcoll_static_file_write_all.o):/global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi/mca/fcoll/static/../../../../../ompi/mca/fcoll/static/fcoll_static_file_write_all.c:929: >>> first defined here >>> make[2]: *** [libmpi.la] Error 2 >>> make[2]: Leaving directory >>> `/global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi' >>> make[1]: *** [all-recursive] Error 1 >>> make[1]: Leaving directory >>> `/global/u1/a/asarje/hopper/openmpi-dev-trunk/build/ompi' >>> make: *** [all-recursive] Error 1 >>> ---------- >>> >>> Any idea why this is happening, and how to fix it? Again, I am using >>> the XE6 platform configuration file. >>> >>> Abhinav. >>> >>> On Wed, Feb 29, 2012 at 12:13 AM, Nathan Hjelm <hje...@lanl.gov> wrote: >>>> >>>> >>>> On Mon, 27 Feb 2012, Abhinav Sarje wrote: >>>> >>>>> Hi Nathan, Gus, Manju, >>>>> >>>>> I got a chance to try out the XE6 support build, but with no success. >>>>> First I was getting this error: "PGC-F-0010-File write error occurred >>>>> (temporary pragma .s file)". After searching online about this error, >>>>> I saw that there is a patch at >>>>> >>>>> "https://svn.open-mpi.org/trac/ompi/attachment/ticket/2913/openmpi-trunk-ident_string.patch"; >>>>> for this particular error. >>>>> >>>>> With the patched version, I did not get this error anymore, but got >>>>> the unknown switch flag error for the flag "-march=amdfam10" >>>>> (specified in the XE6 configuration in the dev trunk) at a particular >>>>> point even if I use the '-noswitcherror' flag with the pgcc compiler. >>>>> >>>>> If I remove this flag (-march=amdfam10), the build fails later at the >>>>> following point: >>>>> ------------------------- >>>>> Making all in mca/ras/alps >>>>> make[2]: Entering directory >>>>> `/{mydir}/openmpi-dev-trunk/build/orte/mca/ras/alps' >>>>> CC ras_alps_component.lo >>>>> CC ras_alps_module.lo >>>>> PGC-F-0206-Can't find include file alps/apInfo.h >>>>> (../../../../../orte/mca/ras/alps/ras_alps_module.c: 37) >>>>> PGC/x86-64 Linux 11.10-0: compilation aborted >>>>> make[2]: *** [ras_alps_module.lo] Error 1 >>>>> make[2]: Leaving directory >>>>> `/{mydir}/openmpi-dev-trunk/build/orte/mca/ras/alps' >>>>> make[1]: *** [all-recursive] Error 1 >>>>> make[1]: Leaving directory `/{mydir}/openmpi-dev-trunk/build/orte' >>>>> make: *** [all-recursive] Error 1 >>>>> -------------------------- >>>> >>>> >>>> This is a known issue with Cray's frontend environment. Build on one of the >>>> internal login nodes. >>>> >>>> >>>> -Nathan >>>> >>>> _______________________________________________ >>>> users mailing list >>>> us...@open-mpi.org >>>> http://www.open-mpi.org/mailman/listinfo.cgi/users >>> >>> _______________________________________________ >>> users mailing list >>> us...@open-mpi.org >>> http://www.open-mpi.org/mailman/listinfo.cgi/users >> >> >> _______________________________________________ >> users mailing list >> us...@open-mpi.org >> http://www.open-mpi.org/mailman/listinfo.cgi/users > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users -- Jeff Squyres jsquy...@cisco.com For corporate legal information go to: http://www.cisco.com/web/about/doing_business/legal/cri/
