Hi James.
Look here for windows:
http://www.pymolwiki.org/index.php/Windows_Install#Pre-compiled_PyMOL
Basically:
You can make a "pymolrc.pym" file, and put it under "C:\Users\YOU". In the
file you can write the following listed. This folder is now in your PyMOL
search path, so you can put pymol
If you are in the PyMOL Viewer and in Edit mode, you can hit
+<{a,g,d,e,...}> to build up a linear polypeptide, where the single
letters correspond to the amino acide identifiers.
Is this useful to you?
Am 23.11.11 11:43, schrieb James Starlight:
Dear PyMol Users!
I wounder to know ab
Hi James,
> C could not find if all those scripts are able to make CAPS on the residues
>
> but if it's not possible Iwant to add some CAP group ( e.g ACE to the N
> term) via builder module. So I've chose ACE residue from that module and
> obtained message
>
> pick location to attach ace
>
>
On 11/23/2011 01:18 PM, James Starlight wrote:
> Thanks Thomas!
>
> Those scripts works fine. Could you tell me if there any way to install
> all of those scripts as the pymol plugins ( that I need not to load this
> scripts every time when I sttart pymol de novo )?
>
>
> James
>
Hi James
Jason V
By the way,
C could not find if all those scripts are able to make CAPS on the residues
but if it's not possible Iwant to add some CAP group ( e.g ACE to the N
term) via builder module. So I've chose ACE residue from that module and
obtained message
pick location to attach ace
how now i could s
Thanks Thomas!
Those scripts works fine. Could you tell me if there any way to install all
of those scripts as the pymol plugins ( that I need not to load this
scripts every time when I sttart pymol de novo )?
James
2011/11/23 James Starlight
> Thanks thomas
>
> Those scripts works fine. Coul
Hi James,
check this PyMOLWiki page: http://pymolwiki.org/index.php/Fab
However, the "fab" command does not take user defined phi/psi angles,
only 4 predefined conformations ("ss" argument). User defined phi/psi
can be handled by these scripts:
http://pymolwiki.org/index.php/CreateSecondaryStr
Dear PyMol Users!
I wounder to know about possible ways of creation of the peptide structures
via PyMol Builder module. In particular I need create a linear structure of
my protein ( with fixed phi and psi angles) for futher folding molecular
dynamics simulation of that peptide. But in builder mod
