Dear PyMol Users!
I wounder to know about possible ways of creation of the peptide structures
via PyMol Builder module. In particular I need create a linear structure of
my protein ( with fixed phi and psi angles) for futher folding molecular
dynamics simulation of that peptide. But in builder module I found only
helix and sheet conformations for each aa. residue. How I can specify
desired values for both torsion angles ?
Also I'd like to know is there any module for pymol wich could be used for
obtaining linear unfolded structure for the defined sequence or folded
protein ( in pdb) ?
Thanks,
James
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