Re: [Freesurfer] recon-all and subcortical regions

2015-02-26 Thread Bruce Fischl
gain Andre Von: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.harvard.edu]" im Auftrag von "Bruce Fischl [fis...@nmr.mgh.harvard.edu] Gesendet: Donnerstag, 26. Februar 2015 15:13 An: Freesurfer support list Betreff: Re: [Freesurfer] recon-all and subcortic

Re: [Freesurfer] recon-all and subcortical regions

2015-02-26 Thread André Schmidt
pport list Betreff: Re: [Freesurfer] recon-all and subcortical regions Hi Andre if you ran recon-all you will have created a volume file names aseg.mgz that has the subcortical segmentation (and an aparc+aseg.mgz that has both subcortical and cortical in it) cheers Bruce On Thu, 26 Feb 2015, André Sch

Re: [Freesurfer] recon-all and subcortical regions

2015-02-26 Thread Bruce Fischl
Hi Andre if you ran recon-all you will have created a volume file names aseg.mgz that has the subcortical segmentation (and an aparc+aseg.mgz that has both subcortical and cortical in it) cheers Bruce On Thu, 26 Feb 2015, André Schmidt wrote: Dear experts, I use recon-all for the parcella