It looks like there is something wrong with that label file (there
should not be 1.7 million lines). Check to see whether the first couple
of lines look similar to the other labels. it might be that mergelabels
is not quite doing the right thing.
doug
On 11/26/14 11:38 AM, Anna Jonsson wro
hi the full error message is
reading input surface /XX/surf/lh.pial...
reading input pial surface /XX/surf/lh.pial...
reading input white surface //X/surf/lh.white...
mris_anatomical_stats: could not parse 1697283th line '60529 -5.365 -17'
in label file
subj: could not rea
What is the full terminal output and error msg?
On 11/21/2014 04:14 AM, Anna Jonsson wrote:
> hi, I have tried to make prefrotnal cortex label by doing first
>
>
>
> mri_annotation2label --subject "$subject" --hemi rh --outdir
> "$subject"/label
>
>
>
> mri_mergelabels -i lh.caudalanteriorcingula
17 November 2014 10:12 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] prefrontal cortex label
hi, anyone can help with this?
On Tue, Nov 4, 2014 at 4:43 PM, Douglas N Greve
mailto:gr...@nmr.mgh.harvard.edu>> wrote:
I don't know. Maybe someone else can weigh in.
doug
On 11/
hi, anyone can help with this?
On Tue, Nov 4, 2014 at 4:43 PM, Douglas N Greve
wrote:
> I don't know. Maybe someone else can weigh in.
> doug
>
> On 11/04/2014 07:38 AM, Anna Jonsson wrote:
> > thank you. which labels are normally included as prefrontal cortex for
> > freesurfer purposes?
> >
>
I don't know. Maybe someone else can weigh in.
doug
On 11/04/2014 07:38 AM, Anna Jonsson wrote:
> thank you. which labels are normally included as prefrontal cortex for
> freesurfer purposes?
>
> On Thu, Oct 23, 2014 at 5:04 PM, Douglas N Greve
> mailto:gr...@nmr.mgh.harvard.edu>> wrote:
>
>
>
thank you. which labels are normally included as prefrontal cortex for
freesurfer purposes?
On Thu, Oct 23, 2014 at 5:04 PM, Douglas N Greve
wrote:
>
> You can use mri_annotation2label to break up the annotation into
> individual labels, then use mris_label2annot to recombine selected
> labels i
You can use mri_annotation2label to break up the annotation into
individual labels, then use mris_label2annot to recombine selected
labels into an annotation or use mri_merge_label to merge them into a
single label. All you have to do is decide with labels define prefontal
doug
On 10/23/2014
