I'm sure that there are a number of ways you could do it. I would suggest, however, making a coronal cut for your frontal labels at Talairach coordinate y = 26, so that only ‘prefrontal’ regions are included - this conforms to the conservative Talairach criteria described by Rajkowska and Goldman-Rakic (1995).<http://scan.oxfordjournals.org.ezp.lib.unimelb.edu.au/content/9/11/1845.full#ref-52> ________________________________ From: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Anna Jonsson [ajonsso...@gmail.com] Sent: Monday, 17 November 2014 10:12 PM To: Freesurfer support list Subject: Re: [Freesurfer] prefrontal cortex label
hi, anyone can help with this? On Tue, Nov 4, 2014 at 4:43 PM, Douglas N Greve <gr...@nmr.mgh.harvard.edu<mailto:gr...@nmr.mgh.harvard.edu>> wrote: I don't know. Maybe someone else can weigh in. doug On 11/04/2014 07:38 AM, Anna Jonsson wrote: > thank you. which labels are normally included as prefrontal cortex for > freesurfer purposes? > > On Thu, Oct 23, 2014 at 5:04 PM, Douglas N Greve > <gr...@nmr.mgh.harvard.edu<mailto:gr...@nmr.mgh.harvard.edu> > <mailto:gr...@nmr.mgh.harvard.edu<mailto:gr...@nmr.mgh.harvard.edu>>> wrote: > > > You can use mri_annotation2label to break up the annotation into > individual labels, then use mris_label2annot to recombine selected > labels into an annotation or use mri_merge_label to merge them into a > single label. All you have to do is decide with labels define > prefontal > doug > > > On 10/23/2014 10:25 AM, Anna Jonsson wrote: > > Dear group, > > > > Is there a way to create a prefrontal cortex label in fresurfer? if > > so, please tell me the exact steps to do so, I am very confused. > > > > > > Thank you, > > > > Anna > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> > > <mailto:Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu>> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu<mailto:gr...@nmr.mgh.harvard.edu> > <mailto:gr...@nmr.mgh.harvard.edu<mailto:gr...@nmr.mgh.harvard.edu>> > Phone Number: 617-724-2358<tel:617-724-2358> > <tel:617-724-2358<tel:617-724-2358>> > Fax: 617-726-7422<tel:617-726-7422> <tel:617-726-7422<tel:617-726-7422>> > > Bugs: > surfer.nmr.mgh.harvard.edu/fswiki/BugReporting<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > > www.nmr.mgh.harvard.edu/facility/filedrop/index.html<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> > Outgoing: > ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> > <mailto:Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to > whom it is > addressed. If you believe this e-mail was sent to you in error and > the e-mail > contains patient information, please contact the Partners > Compliance HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to > you in error > but does not contain patient information, please contact the > sender and properly > dispose of the e-mail. > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu<mailto:gr...@nmr.mgh.harvard.edu> Phone Number: 617-724-2358<tel:617-724-2358> Fax: 617-726-7422<tel:617-726-7422> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
