[Freesurfer] mri_convert ERROR: could not determine file

2014-06-04 Thread Marko Dakovic
Hi there, I have the same problem as Morgan. During execution of reg-feat2anat the error message appears mri_convert ERROR: could not determine file /usr/local/freesurfer/subjectsIf I understood well the solution is in updated version of reg-feat However, I cannot find the updated reg-fea

Re: [Freesurfer] mri_convert ERROR: could not determine file

2013-09-26 Thread Emily Ward
(my trouble is with fslregister-sess though) On Thu, Sep 26, 2013 at 11:25 PM, Emily Ward wrote: > Hi Doug, > > Can you make that file available again? I am having a similar issue > > Thanks, > > Emily > > > On Mon, Jul 29, 2013 at 11:13 AM, Douglas Greve > wrote: > >> >> Hi Morgan, this i

Re: [Freesurfer] mri_convert ERROR: could not determine file

2013-09-26 Thread Emily Ward
Hi Doug, Can you make that file available again? I am having a similar issue Thanks, Emily On Mon, Jul 29, 2013 at 11:13 AM, Douglas Greve wrote: > > Hi Morgan, this is a problem with newer versions of csh -- they changed > the way that errors are reported. Try using this version > > ftp:

Re: [Freesurfer] mri_convert ERROR: could not determine file

2013-07-29 Thread Douglas Greve
Hi Morgan, this is a problem with newer versions of csh -- they changed the way that errors are reported. Try using this version ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/reg-feat2anat doug On 7/28/13 10:00 AM, Bruce Fischl wrote: > Hi Morgan > that is odd. I think Doug is

Re: [Freesurfer] mri_convert ERROR: could not determine file

2013-07-28 Thread Bruce Fischl
Hi Morgan that is odd. I think Doug is traveling which may slow down his normal rapid response time. Bruce On Sat, 27 Jul 2013, Morgan Hough wrote: > Hi there, > > I am trying to run reg-feat2anat and having a bit of an odd problem. It runs > but doesn't produce a anat2exf.register.dat. If I lo

[Freesurfer] mri_convert ERROR: could not determine file

2013-07-27 Thread Morgan Hough
Hi there, I am trying to run reg-feat2anat and having a bit of an odd problem. It runs but doesn't produce a anat2exf.register.dat. If I look at the anat2exf.register.dat.fslregister.log file I see right at the beginning it fail with: /data/results/genDIS mri_convert ERROR: could not determine