Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions Fedora 19 - Freesurfer 5.1

2014-04-30 Thread West, John D.
man Subject: Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions Fedora 19 - Freesurfer 5.1 John, I just noticed that you are looking for v5.1, and that we don't have a centos6 build of that (we started those with v5.2). Can you try v5.3? N. On Tue, 2014-04-29 at 12:20 +,

Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions Fedora 19 - Freesurfer 5.1

2014-04-29 Thread Nick Schmansky, MGH
: Zeke Kaufman > Subject: Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions > Fedora 19 - Freesurfer 5.1 > > John, > > Have you tried the Centos6_x86_64 build of freesurfer on Fedora 19? The > Centos4_x86_64 build is built against a rather old kernel, and likely to

Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions Fedora 19 - Freesurfer 5.1

2014-04-29 Thread West, John D.
: Freesurfer support list Cc: Zeke Kaufman Subject: Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions Fedora 19 - Freesurfer 5.1 John, Have you tried the Centos6_x86_64 build of freesurfer on Fedora 19? The Centos4_x86_64 build is built against a rather old kernel, and likely to go away

Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions Fedora 19 - Freesurfer 5.1

2014-04-28 Thread Nick Schmansky, MGH
t; From:Bruce Fischl > Sent:‎4/‎25/‎2014 11:38 PM > To:Freesurfer support list > Subject:Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions > Fedora 19 - Freesurfer 5.1 > > > Hi John > > we could give you a version with debugging info and source and you >

Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions Fedora 19 - Freesurfer 5.1

2014-04-26 Thread West, John D.
ilto:fis...@nmr.mgh.harvard.edu> Sent: ‎4/‎25/‎2014 11:38 PM To: Freesurfer support list<mailto:freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions Fedora 19 - Freesurfer 5.1 Hi John we could give you a version with debugging info and source and you could

Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions Fedora 19 - Freesurfer 5.1

2014-04-25 Thread Bruce Fischl
Hi John we could give you a version with debugging info and source and you could run it in gdb and find out where it is crashing. Or you could send us the core fie from a version with debugging on cheers Bruce On Fri, 25 Apr 2014, West, John D. wrote: Hello. We are trying to get Frees

[Freesurfer] Segmentatoin fault using Freesurfer Functions Fedora 19 - Freesurfer 5.1

2014-04-25 Thread West, John D.
Hello. We are trying to get Freesurfer 5.1 to work on Fedora 19. The functions we have tried show the help menu successfully when asked, but run into a Segmentation Fault when trying to process anything. Both tkmedit and mri_convert have shown this behavior. Segmentation Faults are notorious