[Freesurfer] missing vertices in mri_glmfit

2009-11-22 Thread Julien Cohen-Adad
hout the surface. thanks, julien -- Julien Cohen-Adad, PhD Athinoula A. Martinos Center for Biomedical Imaging MGH, Harvard Medical School 149 Thirteen St, Charlestown, MA 02129, USA Work: +1 617 724 2463 ; Cell: +1 857 544 6110 ; Fax: +1 617 726 1383 __

[Freesurfer] Tksurfer overlay custom color look up table

2009-10-10 Thread Julien Dubois
Hello everyone is there a way to display an overlay in tksurfer with a clut other than the three available from the gui? Thanks a lot in advance. - Julien ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu

[Freesurfer] Water threshold for skull strip : 1% is still too high

2008-12-15 Thread Julien Dubois
m not sure that it makes any sense - the result is attached, this time too much skull disappeared). - Julien <><>___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] Automated subcortical labeling : what is the RB_all_2006-2-15 atlas?

2008-12-12 Thread Julien Dubois
require messing around with the code? Thank you very much in advance! - Julien ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] register.dat

2008-12-08 Thread Julien Dubois
slated an image by hand before coregistration, for example)? Thank you very much in advance - Julien Dubois ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] Remote display problems

2008-10-01 Thread Julien Dubois
1-7.5.el5 It is noticeable that it used to work before an OS upgrade was done on the server. I have the same problem with 2 other servers (Dell PowerEdge with ATI RN50 according to Dell, which is apparently the same as ATI ES1000). Same GL library

Re: [Freesurfer] Autoredraw

2008-04-20 Thread Julien Dubois
ones that have bothered me most. Maybe there should just be an option whereby it never redraws unless you ask for it manually. In any case, no need to apologize, this is a really useful and well implemented piece of software, so thank you! - Julien ___ Fre

Re: [Freesurfer] Autoredraw

2008-04-20 Thread Julien Dubois
reesurfer-Linux-centos4_x86_64-stable-pub-v4.0.2. Thanks for your help. - Julien On Sat, Apr 19, 2008 at 11:55 PM, Bruce Fischl <[EMAIL PROTECTED]> wrote: > Hi Julien, > > usually autoredraw is off by default. Is it on for you? What system are you > running on? What system is

[Freesurfer] Autoredraw

2008-04-19 Thread Julien Dubois
view menu but that doesn't do much. Thank you. - Julien Dubois ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

[Freesurfer] mris_anatomical_stats log problem

2007-10-26 Thread Julien
t PWD: /space/colossus/7/users/MSpect I could just be overlooking something simple, but I don't see what it is at present. Thanks, Julien -- Julien Wonderlick Research Assistant, Behavioral Neuroscience Laboratory Department of Brain and Cognitive Sciences, MIT Building 46-5127

[Freesurfer] mri_surf2surf resampling error

2006-12-07 Thread Julien
oing anything incorrectly here? Thanks, Julien -- Julien Wonderlick Research Assistant, Behavioral Neuroscience Laboratory Department of Brain and Cognitive Sciences, MIT Building 46-5127 617.253.7437 [EMAIL PROTECTED] ___ Freesurfer mailing list Frees