Hey all,
a colleague is running ccp4 6.0.2 on a MacBook with Timid Tiger.
Built-in Scala is 3.2.25. Because of a bug, he wants to upgrade Scala.
Running Scala 3.3.2-beta5 or 3.2.34 (phil's binaries) fails because
gcc shared libraries are missing. Here's the setup:
[dyn1208-14:ttgt/TT/proc
On 7 May 2008, at 13:32, Andreas Förster wrote:
a colleague is running ccp4 6.0.2 on a MacBook with Timid Tiger.
Built-in Scala is 3.2.25. Because of a bug, he wants to upgrade
Scala. Running Scala 3.3.2-beta5 or 3.2.34 (phil's binaries) fails
because gcc shared libraries are missing.
I
To whom it may concern,
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Hi,
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On May 7, 2008, at 5:57 AM, Chris Richardson wrote:
I tried another tack. I edited the ccp4.info file (in /sw/fink/10.4/
unstable/main/finkinfo/sci) to download the scala_3.2.34 source code
and unpack it over the top of the rest of the source. I'm fairly
sure that you're *not* supposed to
Suggestion please. How TLS file is created to be used in Refmac refinement.
Thanks. Sam
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U Sam schrieb:
Suggestion please. How TLS file is created to be used in Refmac refinement.
Thanks. Sam
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The CCP4i method is to use the "Create / Edit TLS File" task in the
"Refinement" module.
I have used the TLSMD-server before, and I do like it.
I did notice that my R-free would be lower if I used the server's
definitions of TLS groups, but let Refmac do the TLS analysis from scratch
instead o
After further reflection upon my HKL2000 post a few days ago, I felt I
needed to clarify a few things and address some of the responses that I got
to the post. Most of all, I think it necessary for me to offer my sysadmin
an unqualified apology.
First off, in no way was my he impeding our ability
mosflm is an incredibly great program, not to mention free as in beer...
On May 7, 2008, at 3:07 PM, Chris Waddling wrote:
my frustration at HKL2000 not working
Dear Chris,
Bill just beat me to writing the same. I would mention XDS as well.
With best wishes,
Gerard.
--
On Wed, May 07, 2008 at 03:17:07PM -0700, William Scott wrote:
> mosflm is an incredibly great program, not to mention free as in beer...
>
>
>
>
Agreed, but it's nice to have options, as I'm sure we've all experienced,
one program (and sometimes it's HKL2000) just seems to work better than
another with some data. But yes, being that this is the CCP4BB, mosflm does
indeed rock.
Thanks,
Chris
> From: Gerard Bricogne <[EMAIL PROTECTED]>
> mosflm
Bill just beat me to writing the same. I would mention XDS as well.
labelit will index your images
http://adder.lbl.gov/labelit/
... then you give the scripts to mosflm. there's plenty of Acta Cryst.
there to read too.
-bryan
I have run across a problem and I am not sure where it originates
from. When I use a pdb input file that contains a metal atom, say
Cu, that has been written out by coot in refmac I get a read error of
the sort that refmac does not recognize the Cu. If I then edit the
pdb file and change
Hi,
It would be of great help if you can give some
suggestion on the following problem.
I have two data sets of a
complex molecule. One is native (3.6A) and the other is Se-der
(4.5A). In one complex molecule I have one homo-dimer in complex with
DNA( 2 times 90 aa + 2 times 15 na = ~MW 28000,
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