Re: [Bioc-devel] R CMD build not copying PDF vignettes to inst\doc

2013-02-12 Thread Dan Tenenbaum
Hi Norman, On Tue, Feb 12, 2013 at 10:35 PM, Norman Pavelka wrote: > Hi Dan, > > I actually just installed the latest version of R-Devel (r61902) and > used biocLite("plgem") to download and install the latest version of > my package from the server. Although there are no errors or warnings > on

Re: [Bioc-devel] R CMD build not copying PDF vignettes to inst\doc

2013-02-12 Thread Norman Pavelka
Hi Dan, I actually just installed the latest version of R-Devel (r61902) and used biocLite("plgem") to download and install the latest version of my package from the server. Although there are no errors or warnings on the Bioc build/check report, my package still lacks the PDF version of the vigne

Re: [Bioc-devel] R CMD build not copying PDF vignettes to inst\doc

2013-02-12 Thread Norman Pavelka
Hi Dan, I can see the issue is resolved now! I will update my version of R-devel, too. Thanks, Norman On Fri, Feb 8, 2013 at 1:19 PM, Dan Tenenbaum wrote: > On Thu, Feb 7, 2013 at 8:48 PM, Dan Tenenbaum wrote: >> Hi Norman, >> >> >> On Thu, Feb 7, 2013 at 6:59 PM, Norman Pavelka >> wrote: >>

Re: [Bioc-devel] R CMD build not copying PDF vignettes to inst\doc

2013-02-07 Thread Dan Tenenbaum
On Thu, Feb 7, 2013 at 8:48 PM, Dan Tenenbaum wrote: > Hi Norman, > > > On Thu, Feb 7, 2013 at 6:59 PM, Norman Pavelka > wrote: >> Hi, >> >> I am sure many of you may have noticed already, but basically every >> package in Bioc-devel that has a vignette (i.e. almost every package) >> is currentl

Re: [Bioc-devel] R CMD build not copying PDF vignettes to inst\doc

2013-02-07 Thread Dan Tenenbaum
Hi Norman, On Thu, Feb 7, 2013 at 6:59 PM, Norman Pavelka wrote: > Hi, > > I am sure many of you may have noticed already, but basically every > package in Bioc-devel that has a vignette (i.e. almost every package) > is currently issuing warnings in R CMD check: > http://www.bioconductor.org/che

[Bioc-devel] R CMD build not copying PDF vignettes to inst\doc

2013-02-07 Thread Norman Pavelka
Hi, I am sure many of you may have noticed already, but basically every package in Bioc-devel that has a vignette (i.e. almost every package) is currently issuing warnings in R CMD check: http://www.bioconductor.org/checkResults/2.12/bioc-LATEST/ I ran some tests myself and it appears that in the