On Tue, Nov 10, 2009 at 02:09:28PM -0800, William Stein wrote: > > Can you run tests with --verbose or even --gdb so we can see what > causes the errors? >
Argh I was not fully awake when checking this and I ran the tests with
the sage executable from the path rather than the one I just built.
So the mysterious errors are gone. vector_double_dense.pyx passes
long tests, while graphs_database.py now gives a proper doctest error,
see below. I haven't fully analysed the differences, but it seems
that the order in which the graphs are listed is different (it's
supposed to be increasing in the number of vertices, but what I'm
getting is not). I have double-checked and I had no patches applied
before running the upgrade, but I will try building from scratch to
see if I still get this.
[ghi...@artin sage-devel]$ ./sage -t -long
devel/sage/sage/graphs/graph_database.py
sage -t -long "devel/sage/sage/graphs/graph_database.py"
**********************************************************************
File "/opt/sage-devel/devel/sage/sage/graphs/graph_database.py", line 759:
sage: q.show()
Expected:
Graph6 Num Vertices Degree Sequence
------------------------------------------------------------
@ 1 [0]
A? 2 [0, 0]
A_ 2 [1, 1]
B? 3 [0, 0, 0]
BG 3 [0, 1, 1]
BW 3 [1, 1, 2]
Bw 3 [2, 2, 2]
C? 4 [0, 0, 0, 0]
C@ 4 [0, 0, 1, 1]
CB 4 [0, 1, 1, 2]
CK 4 [1, 1, 1, 1]
CF 4 [1, 1, 1, 3]
CJ 4 [0, 2, 2, 2]
CL 4 [1, 1, 2, 2]
CN 4 [1, 2, 2, 3]
C] 4 [2, 2, 2, 2]
C^ 4 [2, 2, 3, 3]
D?? 5 [0, 0, 0, 0, 0]
D?C 5 [0, 0, 0, 1, 1]
D?K 5 [0, 0, 1, 1, 2]
d...@o 5 [0, 1, 1, 1, 1]
D?[ 5 [0, 1, 1, 1, 3]
d...@k 5 [0, 0, 2, 2, 2]
D_K 5 [1, 1, 1, 1, 2]
d...@s 5 [0, 1, 1, 2, 2]
D?{ 5 [1, 1, 1, 1, 4]
d...@[ 5 [0, 1, 2, 2, 3]
d...@s 5 [1, 1, 1, 2, 3]
DBg 5 [1, 1, 2, 2, 2]
DBW 5 [0, 2, 2, 2, 2]
D`K 5 [1, 1, 2, 2, 2]
d...@{ 5 [1, 1, 2, 2, 4]
DB[ 5 [0, 2, 2, 3, 3]
DIk 5 [1, 2, 2, 2, 3]
DBk 5 [1, 1, 2, 3, 3]
DK[ 5 [1, 2, 2, 2, 3]
DLo 5 [2, 2, 2, 2, 2]
E??? 6 [0, 0, 0, 0, 0, 0]
E??G 6 [0, 0, 0, 0, 1, 1]
E??W 6 [0, 0, 0, 1, 1, 2]
E?C_ 6 [0, 0, 1, 1, 1, 1]
E??w 6 [0, 0, 1, 1, 1, 3]
E?CW 6 [0, 0, 0, 2, 2, 2]
EG?W 6 [0, 1, 1, 1, 1, 2]
E?Cg 6 [0, 0, 1, 1, 2, 2]
e...@q? 6 [1, 1, 1, 1, 1, 1]
e...@w 6 [0, 1, 1, 1, 1, 4]
E?Cw 6 [0, 0, 1, 2, 2, 3]
E?Dg 6 [0, 1, 1, 1, 2, 3]
E_?w 6 [1, 1, 1, 1, 1, 3]
E?LO 6 [0, 1, 1, 2, 2, 2]
E?N? 6 [1, 1, 1, 1, 2, 2]
E?Ko 6 [0, 0, 2, 2, 2, 2]
EGCW 6 [0, 1, 1, 2, 2, 2]
E_Cg 6 [1, 1, 1, 1, 2, 2]
E?Bw 6 [1, 1, 1, 1, 1, 5]
E?Dw 6 [0, 1, 1, 2, 2, 4]
E?Fg 6 [1, 1, 1, 1, 2, 4]
E?Kw 6 [0, 0, 2, 2, 3, 3]
e...@hw 6 [0, 1, 2, 2, 2, 3]
e...@fg 6 [1, 1, 1, 2, 2, 3]
E?LW 6 [0, 1, 1, 2, 3, 3]
E?NG 6 [1, 1, 1, 1, 3, 3]
e...@n? 6 [1, 1, 2, 2, 2, 2]
e...@yo 6 [1, 1, 2, 2, 2, 2]
e...@qw 6 [1, 1, 1, 2, 2, 3]
e...@ow 6 [0, 1, 2, 2, 2, 3]
E_Cw 6 [1, 1, 1, 2, 2, 3]
e...@t_ 6 [0, 2, 2, 2, 2, 2]
E_Ko 6 [1, 1, 2, 2, 2, 2]
F???? 7 [0, 0, 0, 0, 0, 0, 0]
F???G 7 [0, 0, 0, 0, 0, 1, 1]
F???W 7 [0, 0, 0, 0, 1, 1, 2]
F??G_ 7 [0, 0, 0, 1, 1, 1, 1]
F???w 7 [0, 0, 0, 1, 1, 1, 3]
F??GW 7 [0, 0, 0, 0, 2, 2, 2]
f...@??w 7 [0, 0, 1, 1, 1, 1, 2]
F??Gg 7 [0, 0, 0, 1, 1, 2, 2]
F?Ca? 7 [0, 1, 1, 1, 1, 1, 1]
f...@w 7 [0, 0, 1, 1, 1, 1, 4]
F??Gw 7 [0, 0, 0, 1, 2, 2, 3]
F??Hg 7 [0, 0, 1, 1, 1, 2, 3]
FG??w 7 [0, 1, 1, 1, 1, 1, 3]
F??XO 7 [0, 0, 1, 1, 2, 2, 2]
F??Z? 7 [0, 1, 1, 1, 1, 2, 2]
F??Wo 7 [0, 0, 0, 2, 2, 2, 2]
f...@?gw 7 [0, 0, 1, 1, 2, 2, 2]
FK??W 7 [1, 1, 1, 1, 1, 1, 2]
FG?Gg 7 [0, 1, 1, 1, 1, 2, 2]
F??Bw 7 [0, 1, 1, 1, 1, 1, 5]
F??Hw 7 [0, 0, 1, 1, 2, 2, 4]
F??Jg 7 [0, 1, 1, 1, 1, 2, 4]
f...@w 7 [1, 1, 1, 1, 1, 1, 4]
F??Ww 7 [0, 0, 0, 2, 2, 3, 3]
F?CPW 7 [0, 0, 1, 2, 2, 2, 3]
F?CJG 7 [0, 1, 1, 1, 2, 2, 3]
F??^? 7 [1, 1, 1, 1, 1, 2, 3]
F??XW 7 [0, 0, 1, 1, 2, 3, 3]
F??ZG 7 [0, 1, 1, 1, 1, 3, 3]
F?CZ? 7 [0, 1, 1, 2, 2, 2, 2]
F_?Hg 7 [1, 1, 1, 1, 1, 2, 3]
F?CqO 7 [0, 1, 1, 2, 2, 2, 2]
F?CaW 7 [0, 1, 1, 1, 2, 2, 3]
F?LCG 7 [1, 1, 1, 1, 2, 2, 2]
F?C_w 7 [0, 0, 1, 2, 2, 2, 3]
FG?Gw 7 [0, 1, 1, 1, 2, 2, 3]
F?Ch_ 7 [0, 0, 2, 2, 2, 2, 2]
FG?Wo 7 [0, 1, 1, 2, 2, 2, 2]
F_?XO 7 [1, 1, 1, 1, 2, 2, 2]
FK?GW 7 [1, 1, 1, 1, 2, 2, 2]
Got:
Graph6 Num Vertices Degree Sequence
------------------------------------------------------------
@ 1 [0]
A? 2 [0, 0]
B? 3 [0, 0, 0]
C? 4 [0, 0, 0, 0]
D?? 5 [0, 0, 0, 0, 0]
E??? 6 [0, 0, 0, 0, 0, 0]
F???? 7 [0, 0, 0, 0, 0, 0, 0]
A_ 2 [1, 1]
BG 3 [0, 1, 1]
C@ 4 [0, 0, 1, 1]
D?C 5 [0, 0, 0, 1, 1]
E??G 6 [0, 0, 0, 0, 1, 1]
F???G 7 [0, 0, 0, 0, 0, 1, 1]
BW 3 [1, 1, 2]
CB 4 [0, 1, 1, 2]
CK 4 [1, 1, 1, 1]
D?K 5 [0, 0, 1, 1, 2]
d...@o 5 [0, 1, 1, 1, 1]
E??W 6 [0, 0, 0, 1, 1, 2]
E?C_ 6 [0, 0, 1, 1, 1, 1]
F???W 7 [0, 0, 0, 0, 1, 1, 2]
F??G_ 7 [0, 0, 0, 1, 1, 1, 1]
Bw 3 [2, 2, 2]
CF 4 [1, 1, 1, 3]
CJ 4 [0, 2, 2, 2]
CL 4 [1, 1, 2, 2]
D?[ 5 [0, 1, 1, 1, 3]
d...@k 5 [0, 0, 2, 2, 2]
D_K 5 [1, 1, 1, 1, 2]
d...@s 5 [0, 1, 1, 2, 2]
E??w 6 [0, 0, 1, 1, 1, 3]
E?CW 6 [0, 0, 0, 2, 2, 2]
EG?W 6 [0, 1, 1, 1, 1, 2]
E?Cg 6 [0, 0, 1, 1, 2, 2]
e...@q? 6 [1, 1, 1, 1, 1, 1]
F???w 7 [0, 0, 0, 1, 1, 1, 3]
F??GW 7 [0, 0, 0, 0, 2, 2, 2]
f...@??w 7 [0, 0, 1, 1, 1, 1, 2]
F??Gg 7 [0, 0, 0, 1, 1, 2, 2]
F?Ca? 7 [0, 1, 1, 1, 1, 1, 1]
CN 4 [1, 2, 2, 3]
C] 4 [2, 2, 2, 2]
D?{ 5 [1, 1, 1, 1, 4]
d...@[ 5 [0, 1, 2, 2, 3]
d...@s 5 [1, 1, 1, 2, 3]
DBg 5 [1, 1, 2, 2, 2]
DBW 5 [0, 2, 2, 2, 2]
D`K 5 [1, 1, 2, 2, 2]
e...@w 6 [0, 1, 1, 1, 1, 4]
E?Cw 6 [0, 0, 1, 2, 2, 3]
E?Dg 6 [0, 1, 1, 1, 2, 3]
E_?w 6 [1, 1, 1, 1, 1, 3]
E?LO 6 [0, 1, 1, 2, 2, 2]
E?N? 6 [1, 1, 1, 1, 2, 2]
E?Ko 6 [0, 0, 2, 2, 2, 2]
EGCW 6 [0, 1, 1, 2, 2, 2]
E_Cg 6 [1, 1, 1, 1, 2, 2]
f...@w 7 [0, 0, 1, 1, 1, 1, 4]
F??Gw 7 [0, 0, 0, 1, 2, 2, 3]
F??Hg 7 [0, 0, 1, 1, 1, 2, 3]
FG??w 7 [0, 1, 1, 1, 1, 1, 3]
F??XO 7 [0, 0, 1, 1, 2, 2, 2]
F??Z? 7 [0, 1, 1, 1, 1, 2, 2]
F??Wo 7 [0, 0, 0, 2, 2, 2, 2]
f...@?gw 7 [0, 0, 1, 1, 2, 2, 2]
FK??W 7 [1, 1, 1, 1, 1, 1, 2]
FG?Gg 7 [0, 1, 1, 1, 1, 2, 2]
C^ 4 [2, 2, 3, 3]
d...@{ 5 [1, 1, 2, 2, 4]
DB[ 5 [0, 2, 2, 3, 3]
DIk 5 [1, 2, 2, 2, 3]
DBk 5 [1, 1, 2, 3, 3]
DK[ 5 [1, 2, 2, 2, 3]
DLo 5 [2, 2, 2, 2, 2]
E?Bw 6 [1, 1, 1, 1, 1, 5]
E?Dw 6 [0, 1, 1, 2, 2, 4]
E?Fg 6 [1, 1, 1, 1, 2, 4]
E?Kw 6 [0, 0, 2, 2, 3, 3]
e...@hw 6 [0, 1, 2, 2, 2, 3]
e...@fg 6 [1, 1, 1, 2, 2, 3]
E?LW 6 [0, 1, 1, 2, 3, 3]
E?NG 6 [1, 1, 1, 1, 3, 3]
e...@n? 6 [1, 1, 2, 2, 2, 2]
e...@yo 6 [1, 1, 2, 2, 2, 2]
e...@qw 6 [1, 1, 1, 2, 2, 3]
e...@ow 6 [0, 1, 2, 2, 2, 3]
E_Cw 6 [1, 1, 1, 2, 2, 3]
e...@t_ 6 [0, 2, 2, 2, 2, 2]
E_Ko 6 [1, 1, 2, 2, 2, 2]
F??Bw 7 [0, 1, 1, 1, 1, 1, 5]
F??Hw 7 [0, 0, 1, 1, 2, 2, 4]
F??Jg 7 [0, 1, 1, 1, 1, 2, 4]
f...@w 7 [1, 1, 1, 1, 1, 1, 4]
F??Ww 7 [0, 0, 0, 2, 2, 3, 3]
F?CPW 7 [0, 0, 1, 2, 2, 2, 3]
F?CJG 7 [0, 1, 1, 1, 2, 2, 3]
F??^? 7 [1, 1, 1, 1, 1, 2, 3]
F??XW 7 [0, 0, 1, 1, 2, 3, 3]
F??ZG 7 [0, 1, 1, 1, 1, 3, 3]
F?CZ? 7 [0, 1, 1, 2, 2, 2, 2]
F_?Hg 7 [1, 1, 1, 1, 1, 2, 3]
F?CqO 7 [0, 1, 1, 2, 2, 2, 2]
F?CaW 7 [0, 1, 1, 1, 2, 2, 3]
F?LCG 7 [1, 1, 1, 1, 2, 2, 2]
F?C_w 7 [0, 0, 1, 2, 2, 2, 3]
FG?Gw 7 [0, 1, 1, 1, 2, 2, 3]
F?Ch_ 7 [0, 0, 2, 2, 2, 2, 2]
FG?Wo 7 [0, 1, 1, 2, 2, 2, 2]
F_?XO 7 [1, 1, 1, 1, 2, 2, 2]
FK?GW 7 [1, 1, 1, 1, 2, 2, 2]
**********************************************************************
1 items had failures:
1 of 5 in __main__.example_15
***Test Failed*** 1 failures.
For whitespace errors, see the file
/home/ghitza/.sage//tmp/.doctest_graph_database.py
[1.7 s]
exit code: 1024
----------------------------------------------------------------------
The following tests failed:
sage -t -long "devel/sage/sage/graphs/graph_database.py"
Total time for all tests: 1.7 seconds
--
Alex Ghitza -- Lecturer in Mathematics -- The University of Melbourne
-- Australia -- http://www.ms.unimelb.edu.au/~aghitza/
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