Hi,
I've made a new submission.
There is no note about checking installed package size.Thanks.
Sylvain
Le dimanche 5 mai 2019 à 14:44:24 UTC+2, cartograf...@gmail.com
<cartograf...@gmail.com> a écrit :
Hi,
After I submitted my package I received some remarks e.g add the exmple that
I've taken into account.
So, I used R-devel CMD check, I've always one 1 note about maintener which it's
not a problem to submit and another note due to package size.
...
* checking installed package size ... NOTE installed size is 5.0Mb
sub-directories of 1Mb or more:
doc 4.4Mb...
I would like to know if I can submit in CRAN with this note if not, do you hnow
how I can solve this issue?
In vignette directories the html file size is of 4.3MB. I don't know how I can
reduce the size. There are a lot of picture (cartography).
Thanks in advance to your replySylvain
Le dimanche 7 avril 2019 à 21:32:07 UTC+2, Duncan Murdoch
<murdoch.dun...@gmail.com> a écrit :
On 07/04/2019 3:01 p.m., cartograf...@gmail.com wrote:
> Thanks!
> So, I've already check and I didn't see the descrption of the note in
> 00check.log.
> The only thing I can say is that there's a problem with Author.
> I tried to put Authors@R and it also generates notes.
> Do you have any idea?
>
> You will find hereafter the copy of the file 00check.log.
> Thanks in advance
> ----------------
> * using log directory ‘/home/sylvain/svn/cartograflow.Rcheck’
> * using R Under development (unstable) (2019-04-04 r76316)
> * using platform: x86_64-pc-linux-gnu (64-bit)
> * using session charset: UTF-8
> * using option ‘--as-cran’
> * checking for file ‘cartograflow/DESCRIPTION’ ... OK
> * this is package ‘cartograflow’ version ‘1.0.0.0’
> * package encoding: UTF-8
> * checking CRAN incoming feasibility ... NOTE
> Maintainer: ‘Sylvain Blondeau <blondeau.sylv...@yahoo.fr>’
>
> New submission
>
> Author field should be Authors@R. Current value is:
> c(person("Sylvain", "Blondeau", email = "blondeau.sylv...@yahoo.fr",
> role = c("cre","aut")),
> person("other", "other", email = "other.ot...@gmail.com",
> role = c("aut")))
That second author doesn't look right, but I don't think the note is
complaining about that. I think you probably have put something like
this in your DESCRIPTION file:
Author: c(person("Sylvain", "Blondeau", email =
"blondeau.sylv...@yahoo.fr", role = c("cre","aut")),
person("other", "other", email = "other.ot...@gmail.com",
role = c("aut")))
and what it is saying is that you should instead use
Authors@R: c(person("Sylvain", "Blondeau", email =
"blondeau.sylv...@yahoo.fr", role = c("cre","aut")),
person("other", "other", email = "other.ot...@gmail.com",
role = c("aut")))
If my guess is right and you fix it, you may still get a NOTE. To make
it easier for the CRAN maintainers to know who to contact in case of an
issue with the package, they display information about the package
maintainer in a NOTE. Since most NOTEs indicate likely problems, it
would probably make sense for them to use some other formatting for the
message, but that's how it is.
Duncan Murdoch
> * checking package namespace information ... OK
> * checking package dependencies ... OK
> * checking if this is a source package ... OK
> * checking if there is a namespace ... OK
> * checking for executable files ... OK
> * checking for hidden files and directories ... OK
> * checking for portable file names ... OK
> * checking for sufficient/correct file permissions ... OK
> * checking serialization versions ... OK
> * checking whether package ‘cartograflow’ can be installed ... OK
> * checking installed package size ... OK
> * checking package directory ... OK
> * checking for future file timestamps ... OK
> * checking ‘build’ directory ... OK
> * checking DESCRIPTION meta-information ... OK
> * checking top-level files ... OK
> * checking for left-over files ... OK
> * checking index information ... OK
> * checking package subdirectories ... OK
> * checking R files for non-ASCII characters ... OK
> * checking R files for syntax errors ... OK
> * checking whether the package can be loaded ... OK
> * checking whether the package can be loaded with stated dependencies ... OK
> * checking whether the package can be unloaded cleanly ... OK
> * checking whether the namespace can be loaded with stated dependencies
> ... OK
> * checking whether the namespace can be unloaded cleanly ... OK
> * checking use of S3 registration ... OK
> * checking dependencies in R code ... OK
> * checking S3 generic/method consistency ... OK
> * checking replacement functions ... OK
> * checking foreign function calls ... OK
> * checking R code for possible problems ... OK
> * checking Rd files ... OK
> * checking Rd metadata ... OK
> * checking Rd line widths ... OK
> * checking Rd cross-references ... OK
> * checking for missing documentation entries ... OK
> * checking for code/documentation mismatches ... OK
> * checking Rd \usage sections ... OK
> * checking Rd contents ... OK
> * checking for unstated dependencies in examples ... OK
> * checking installed files from ‘inst/doc’ ... OK
> * checking files in ‘vignettes’ ... OK
> * checking examples ... OK
> * checking for unstated dependencies in ‘tests’ ... OK
> * checking tests ... OK
> Running ‘testthat.R’
> * checking for unstated dependencies in vignettes ... OK
> * checking package vignettes in ‘inst/doc’ ... OK
> * checking re-building of vignette outputs ... OK
> * checking PDF version of manual ... OK
> * DONE
> Status: 1 NOTE
>
>
> Le dimanche 7 avril 2019 à 18:22:32 UTC+2, Duncan Murdoch
> <murdoch.dun...@gmail.com> a écrit :
>
>
> On 07/04/2019 12:16 p.m., cartograf...@gmail.com
> <mailto:cartograf...@gmail.com> wrote:
> > Hi,Thanks to your reply and your information. Right now it stays only
> one note when I've made R-devel CMD CHECK --as-cran. So, I didn't
> identified this note in repertory R.check. What's file I've to check?I'd
> like to know if I can new submission in CRAN with one note. Sylvain
>
> It will be in cartograflow.Rcheck/00check.log.
>
> Duncan Murdoch
>
>
> >
> >
> >
> > Envoyé depuis Yahoo Mail pour Android
> >
> > Le jeu., avr. 4, 2019 à 17:09, Maëlle
> SALMON<maelle.sal...@yahoo.se <mailto:maelle.sal...@yahoo.se>> a écrit
> : I'd recommend reading
> https://r-pkgs.org/description.html#dependencies (and the rest of the
> book is very good as well), it'll help you understand why and how to
> declare dependencies.
> >
> >
> >
> >
> > Den torsdag 4 april 2019 17:05:02 CEST, cartograf...@gmail.com
> <mailto:cartograf...@gmail.com> <cartograf...@gmail.com
> <mailto:cartograf...@gmail.com>> skrev:
> >
> > How I can declare the dependencies in DESCRIPTION file?
> > depends: library(dplyr,dependencies =TRUE)
> > Thanks
> > Envoyé depuis Yahoo Mail pour Android
> >
> > Le jeu., avr. 4, 2019 à 14:42, Uwe
> Ligges<lig...@statistik.tu-dortmund.de
> <mailto:lig...@statistik.tu-dortmund.de>> a écrit : .... or forgot to
> declare a dependency on that package in the
> > DESCRIPTION file...
> >
> > Best,
> > Uwe Ligges
> >
> > On 04.04.2019 13:34, Sebastian Meyer wrote:
> >> There are probably no clairvoyants around here. So, again, without
> >> access to the up-to-date source code of your package, nobody will be
> >> able to help.
> >>
> >> "there is no package called ..." means that the given package is not
> >> installed in any of the libraries currently in use by R (see .libPaths()
> >> for the relevant paths). Maybe you have installed "dplyr" in a library
> >> used by your standard R installation, but not in any library used by
> >> your R-devel installation (which you seem to use for checking the
> >> package)? Just a wild guess.
> >>
> >>
> >> Am 04.04.19 um 13:14 schrieb cartograf...@gmail.com
> <mailto:cartograf...@gmail.com>:
> >>> I follow up your recommendation and for the moment I didn't used
> >>> "conflicted".
> >>>
> >>> So, I've made the nex R CMD check and I have the problem
> >>> Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck =
> >>> vI[[i]]) :
> >>> there is no package called ‘dplyr’
> >>>
> >>> How I can solve this issue?
> >>>
> >>> Thanks in advance
> >>>
> >>> Le jeudi 4 avril 2019 à 08:22:26 UTC+2, Sebastian Meyer
> >>> <seb.me...@fau.de <mailto:seb.me...@fau.de>> a écrit :
> >>>
> >>>
> >>> Note that output concerning masked objects are just messages which do
> >>> not cause your vignette to fail. So it is not stricly necessary to
> start
> >>> working on these conflicts now.
> >>>
> >>> However, looking closely at the win-builder check results
> >>>
> (https://win-builder.r-project.org/incoming_pretest/cartograflow_0.0.0.9000_20190324_230822/Windows/00check.log),
> >>> I see the following output below these messages
> >>>
> >>>> Warning in eval(expr, envir, enclos) : NAs introduced by coercion
> >>>> Quitting from lines 529-573 (cartograflow.Rmd)
> >>>> Error: processing vignette 'cartograflow.Rmd' failed with diagnostics:
> >>>> argument is of length zero
> >>>
> >>> So the problem actually is in lines 529-573 of the cartograflow.Rmd
> >>> vignette (at least in the version submitted to win-builder a few
> weeks ago).
> >>>
> >>> Running tools::buildVignette("cartograflow.Rmd") locally, I see
> >>>
> >>>> Error in if (horiz) { : argument is of length zero
> >>>
> >>> and the subsequent traceback() shows that the error originates from
> >>>
> >>>> layoutLayer(title = "Professional mobility in Greater Paris",
> >>>> coltitle = "black", author = "Cartograflow, 2019",
> sources =
> >>> "Sources : data : INSEE, RP, MOBPRO, 2017 ; basemap : IGN, APUR, UMS
> >>> 2414 RIATE, 2018.",
> >>>> scale = 0.2, tabtitle = TRUE, frame = TRUE, north(pos =
> >>> "topright"),
> >>>> col = "grey")
> >>>
> >>> So it seems to me that the unnamed argument 'north(pos =
> "topright")' is
> >>> wrongly matched to the "horiz" argument of layoutLayer().
> >>>
> >>> Cheers,
> >>>
> >>> Sebastian
> >>>
> >>>
> >>> Am 04.04.19 um 07:20 schrieb cartograf...@gmail.com
> <mailto:cartograf...@gmail.com>
> >>> <mailto:cartograf...@gmail.com <mailto:cartograf...@gmail.com>>:
> >>>>
> >>>> Hi,I don't know if my explanations are clear.I tried several way to
> >>> solve this problem w/o success. Someone have an idea ?Thanks in advance
> >>>>
> >>>> On 2019-04-03 2:11 p.m., cartograf...@gmail.com
> <mailto:cartograf...@gmail.com>
> >>> <mailto:cartograf...@gmail.com <mailto:cartograf...@gmail.com>> wrote:
> >>>>> Hi,
> >>>>>
> >>>>> I come back to you because I have always the problem with
> >>> devtools::check of my package.
> >>>>>
> >>>>> I used the command to check my package with R-devel :
> >>>>> sylvain@sylvain <mailto:sylvain@sylvain> <mailto:sylvain@sylvain
> <mailto:sylvain@sylvain>>:~/svn$ bash R-devel.sh CMD
> >>> check --as-cran
> >>> /home/sylvain/work/12_R_studio/package/cartograflow_0.0.0.1.tar.gz
> >>>>>
> >>>>> When I start the rmd file there is a warning due to package dplyr :
> >>>>> Attaching package: 'dplyr'
> >>>>> The following objects are masked from 'package:stats':
> >>>>> filter, lag
> >>>>> The following objects are masked from 'package:base':
> >>>>> intersect, setdiff, setequal, union
> >>>>>
> >>>>> The solve this issue I added in rmd file, description file and the
> >>> namespace the package conflicted.
> >>>>> So, the package conflicted avoid to have this warning.
> >>>>>
> >>>>> But when I run R-devel CMD check I have a new issue that is Error in
> >>> loadNamespace...no package called ‘conflicted’ (see below)
> >>>>>
> >>>>> Can you help me to solve this issue if tit's possible?
> >>>>> Thanks in advance to your help !
> >>>>> Sylvain
> >>>>> -----------------
> >>>>> Below extract of 00check.log
> >>>>> * checking whether package ‘cartograflow’ can be installed ... ERROR
> >>>>> Installation failed.
> >>>>> See ‘/home/sylvain/svn/cartograflow.Rcheck/00install.out’ for
> details.
> >>>>> * DONE
> >>>>> Status: 1 ERROR, 1 NOTE
> >>>>>
> >>>>> Below 00install.out
> >>>>> * installing *source* package ‘cartograflow’ ...
> >>>>> ** using staged installation
> >>>>> ** R
> >>>>> ** inst
> >>>>> ** byte-compile and prepare package for lazy loading
> >>>>> Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck =
> >>> vI[[i]]) :
> >>>>> there is no package called ‘conflicted’
> >>>>> Calls: <Anonymous> ... loadNamespace -> withRestarts ->
> >>> withOneRestart -> doWithOneRestart
> >>>>> Exécution arrêtée
> >>>>> ERROR: lazy loading failed for package ‘cartograflow’
> >>>>> * removing ‘/home/sylvain/svn/cartograflow.Rcheck/cartograflow’
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>> Le mardi 26 mars 2019 à 22:42:21 UTC+1, Henrik Bengtsson
> >>> <henrik.bengts...@gmail.com <mailto:henrik.bengts...@gmail.com>
> <mailto:henrik.bengts...@gmail.com <mailto:henrik.bengts...@gmail.com>>>
> a écrit :
> >>>>>
> >>>>> FWIW, you should be able to reproduce at least the following
> NOTEs
> >>>>> with your current R 3.5.2 and R CMD check --as-cran:
> >>>>>
> >>>>> * checking CRAN incoming feasibility ... NOTE
> >>>>> Maintainer: ‘cartogRaflow <cartograf...@gmail.com
> <mailto:cartograf...@gmail.com>
> >>> <mailto:cartograf...@gmail.com <mailto:cartograf...@gmail.com>>>’
> >>>>>
> >>>>> New submission
> >>>>>
> >>>>> Version contains large components (0.0.0.9000)
> >>>>>
> >>>>> Possibly mis-spelled words in DESCRIPTION:
> >>>>> flowmapping (7:41)
> >>>>>
> >>>>> Author field should be Authors@R. <mailto:Authors@R.>
> <mailto:Authors@R. <mailto:Authors@R.>> Current value is:
> >>>>> c(person("Françoise", "Bahoken", email =
> >>>>> "francoise.baho...@ifsttar.fr
> <mailto:francoise.baho...@ifsttar.fr>
> <mailto:francoise.baho...@ifsttar.fr
> <mailto:francoise.baho...@ifsttar.fr>>",
> >>> role = c("cre","aut")),
> >>>>> person("Sylvain", "Blondeau", email =
> >>>>> "blondeau.sylv...@yahoo.fr <mailto:blondeau.sylv...@yahoo.fr>
> <mailto:blondeau.sylv...@yahoo.fr <mailto:blondeau.sylv...@yahoo.fr>>", role
> >>> = c("aut"))
> >>>>>
> >>>>> The Title field should be in title case. Current version is:
> >>>>> ‘thematic cartography of flows and movements’
> >>>>> In title case that is:
> >>>>> ‘Thematic Cartography of Flows and Movements’
> >>>>>
> >>>>> Those are all classical mistakes ("we've all been there"). The
> >>>>> vignette errors may or may not be specific to R devel.
> >>>>>
> >>>>> /Henrik
> >>>>>
> >>>>> On Tue, Mar 26, 2019 at 2:29 PM cartograf...@gmail.com
> <mailto:cartograf...@gmail.com>
> >>> <mailto:cartograf...@gmail.com <mailto:cartograf...@gmail.com>>
> >>>>> <cartograf...@gmail.com <mailto:cartograf...@gmail.com>
> <mailto:cartograf...@gmail.com <mailto:cartograf...@gmail.com>>> wrote:
> >>>>>>
> >>>>>> Hi, l've made R CMD check --as-cran on rstudio 3.5.2Why I have to
> >>> use r-devel?
> >>>>>> I confirm that I didn't received à error message when I've made
> >>> dev_tool::check.
> >>>>>> How can I solve my problem ?
> >>>>>> Thanks in advance Sylvain
> >>>>>>
> >>>>>>
> >>>>>> nvoyé depuis Yahoo Mail pour Android
> >>>>>>
> >>>>>> Le lun., mars 25, 2019 à 23:38, Uwe
> >>> Ligges<lig...@statistik.tu-dortmund.de
> <mailto:lig...@statistik.tu-dortmund.de>
> >>> <mailto:lig...@statistik.tu-dortmund.de
> <mailto:lig...@statistik.tu-dortmund.de>>> a écrit : I cannot beloeve
> >>> it. But this is certainly not R-devel?
> >>>>>>
> >>>>>> Not sure about devtools which we do not use on CRAN, but simply
> >>>>>>
> >>>>>> R CMD check --as-cran
> >>>>>>
> >>>>>> with a recent R-devel version on the package tarball should
> reproduce
> >>>>>> the findings.
> >>>>>>
> >>>>>> Best,
> >>>>>> Uwe Ligges
> >>>>>>
> >>>>>>
> >>>>>> On 25.03.2019 23:12, cartograf...@gmail.com
> <mailto:cartograf...@gmail.com>
> >>> <mailto:cartograf...@gmail.com <mailto:cartograf...@gmail.com>> wrote:
> >>>>>>> Hello,
> >>>>>>> I've submitted my package cartograflow and I received an email from
> >>> your teeam that it does not pass the incoming checks
> >>> automatically.Debian:
> >>>
> <https://win-builder.r-project.org/incoming_pretest/cartograflow_0.0.0.9000_20190324_230822/Debian/00check.log>
> >>>>>>> Status: 1 ERROR, 2 WARNINGs, 1 NOTE
> >>>>>>>
> >>>>>>> So, I've made the new check on my plateform (linux ubuntu) and the
> >>> check is OK.I used : ==> devtools::check(args =
> >>> c('--no-manual','--as-cran'))Status is :
> >>>>>>> ── R CMD check results ──────────────────────────── cartograflow
> >>> 0.0.0.9000 ────
> >>>>>>> Duration: 54.6s
> >>>>>>> 0 errors ✔ | 0 warnings ✔ | 0 notes ✔
> >>>>>>> R CMD check succeeded
> >>>>>>> Can you help me to fix the problem?
> >>>>>>> Thanks in advance to your replySylvain
> >>>>>>> [[alternative HTML version deleted]]
> >>>>>>>
> >>>>>>> ______________________________________________
> >>>>>>> R-package-devel@r-project.org
> <mailto:R-package-devel@r-project.org>
> >>> <mailto:R-package-devel@r-project.org
> <mailto:R-package-devel@r-project.org>> mailing list
> >>>>>>> https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >>>>>>>
> >>>>>>
> >>>>>>
> >>>>>> [[alternative HTML version deleted]]
> >>>>>>
> >>>>>> ______________________________________________
> >>>>>> R-package-devel@r-project.org
> <mailto:R-package-devel@r-project.org>
> <mailto:R-package-devel@r-project.org
> <mailto:R-package-devel@r-project.org>>
> >>> mailing list
> >>>>>> https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >>>
> >>>>> [[alternative HTML version deleted]]
> >>>>>
> >>>>> ______________________________________________
> >>>>> R-package-devel@r-project.org
> <mailto:R-package-devel@r-project.org>
> <mailto:R-package-devel@r-project.org
> <mailto:R-package-devel@r-project.org>>
> >>> mailing list
> >>>>> https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >>>>>
> >>>>
> >>>> ______________________________________________
> >>>> R-package-devel@r-project.org
> <mailto:R-package-devel@r-project.org>
> <mailto:R-package-devel@r-project.org
> <mailto:R-package-devel@r-project.org>>
> >>> mailing list
> >>>> https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >>>>
> >>>>
> >>>>
> >>>> [[alternative HTML version deleted]]
> >>>>
> >>>> ______________________________________________
> >>>> R-package-devel@r-project.org
> <mailto:R-package-devel@r-project.org>
> <mailto:R-package-devel@r-project.org
> <mailto:R-package-devel@r-project.org>>
> >>> mailing list
> >>>> https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >>>>
> >>
> >> ______________________________________________
> >> R-package-devel@r-project.org <mailto:R-package-devel@r-project.org>
> mailing list
> >> https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >>
> >
> >
> > [[alternative HTML version deleted]]
> >
> > ______________________________________________
> > R-package-devel@r-project.org <mailto:R-package-devel@r-project.org>
> mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >
> > [[alternative HTML version deleted]]
> >
> > ______________________________________________
> > R-package-devel@r-project.org <mailto:R-package-devel@r-project.org>
> mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >
>
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