You need to create a new object of the part you want transparent and then set
that cartoon as transparent (and hide the "original" cartoon for the
selection).
G.
________________________________
Da: James Starlight <jmsstarli...@gmail.com>
A: pymol-users <pymol-users@lists.sourceforge.net>
Inviato: Giovedì 6 Giugno 2013 12:36
Oggetto: [PyMOL] Cartoon transparency
Dear PyMol users!
I want to set transparency on the selected
carton region of my protein ( I have closed GFP barell with the
chromophore inside it so I'd like set transparency of some beta-shits to
make chromophore easily visible ).
In PyMol I've selected region corresponded to that Beta-sheets and than used
set cartoon_transparency, 0.5, sele
unfortunatelly there were no any changes after this :(
How I could solve it ?
Thanks for help,
James
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