External Email - Use Caution
Hi,
I have indeed the same outputs.
Here is the output of the below commands:
[schopenhauer:LC_HYP] (nmr-dev-env) which mri_sclimbic_seg
/usr/local/freesurfer/7.4.1/bin/mri_sclimbic_seg
[schopenhauer:LC_HYP] (nmr-dev-env) which fspython
/usr/local/freesurfer/7.4.1/bin/fspython
[schopenhauer:LC_HYP] (nmr-dev-env) bash -x `which mri_sclimbic_seg` --s
HAB_008_CST_2.4
+ '[' '!' -e /usr/local/freesurfer/7.4.1 ']'
+ exec /usr/local/freesurfer/7.4.1/bin/fspython
/usr/local/freesurfer/7.4.1/python/scripts/mri_sclimbic_seg --s HAB_008_CST_2.4
/usr/local/freesurfer/7.4.1/python/scripts/mri_sclimbic_seg --s HAB_008_CST_2.4
Excluding seg [853]
Using CPU
Illegal instruction (core dumped)
Heidi
________________________________
From: fsbuild <fsbu...@contbay.com>
Sent: Sunday, August 20, 2023 10:41 PM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Cc: Jacobs, Heidi I.,PHD <hjac...@mgh.harvard.edu>
Subject: Re: [Freesurfer] ScLimbic issue
External Email - Use Caution
Check if you see the following output for these commands,
% which mri_sclimbic_seg
/usr/local/freesurfer/7.4.1/bin/mri_sclimbic_seg
% which fspython
/usr/local/freesurfer/7.4.1/bin/fspython
Try running that command as listed below followed by your own arguments to it,
i.e. try,
% bash -x `which mri_sclimbic_seg` --s HAB_008_CST_2.4
... and send along the output ...
- R.
On Aug 20, 2023, at 21:31, Jacobs, Heidi I.,PHD <hjac...@mgh.harvard.edu> wrote:
mri_sclimbic_seg
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