External Email - Use Caution
Can you try the 7.4.1 version? Can you also send your full command line
and terminal output?
On 8/20/2023 2:57 PM, Jacobs, Heidi I.,PHD wrote:
External Email - Use Caution
Hello FreeSurfer team,
I am trying to run the sclimbic tool on our FreeSurfer processed
images (from the Martinos center).
For some unknown reason I keep getting the same problem:
Excluding seg [853]
Using CPU
Illegal instruction (core dumped)
Not sure what this means?
I have sourced /usr/local/freesurfer/nmr-dev-env and set the
SUBJECTS_DIR correctly.
I tried with the - - s option referring to the FreeSurfer processed
subject as well as the - - i option, referring to the orig.mgz image.
Using the nifti image or the mgz image doesn’t make a difference either.
Any suggestions on what the problem may be or how to resolve this?
Thank you
All the best
Heidi
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://secure-web.cisco.com/1gHyaW6unXwHyMtMMZ7-L_jwDtVEg-sU160beOdvr8qja_eyAvrbzeMGEPHVo6ieOB5AGmAUwMRMWrnVK0Vd_0viUhMigLTfjDDJCm1u7TL9I3XpWL5yEuAYUMaChlbfe_w1wnivO2j6HJlwr9ENfEBcmkG0znHkINb520m0gUQjsC_D5F4DOzWcvz4c46TWh9_MHbtlPj8qytfTstdoQfTi6L4gmij87sTPTmg6go3jYSZ4kpa0uSgUpHeKQ3xV3/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Mass General Brigham
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline
<https://www.massgeneralbrigham.org/complianceline> .
Please note that this e-mail is not secure (encrypted). If you do not wish to
continue communication over unencrypted e-mail, please notify the sender of
this message immediately. Continuing to send or respond to e-mail after
receiving this message means you understand and accept this risk and wish to
continue to communicate over unencrypted e-mail.
