You can ignore that. That was put in by a contractor who put it into
every source file that did not set the random see. No randomness is used
in this program, so you are safe
On 6/16/2022 9:58 AM, Benjamin Deck wrote:
External Email - Use Caution
Hi Freesurfer experts,
While trying to create a custom annotation file I get the following
warning:
mris_label2annot --s sub-DAEK --a yeo2011 --no-unknown --ctab
sub-DAEK_yeoLUT.txt --ldir
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels/
--hemi rh
Reading ctab sub-DAEK_yeoLUT.txt
Number of ctab entries 105
INFO: no labels specified, generating from ctab
mris_label2anno supposed to be reproducible but seed not set
51
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_10_ROIs_1_rh_native.label
52
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_11_ROIs_1_rh_native.label
53
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_12_ROIs_1_rh_native.label
54
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_12_ROIs_2_rh_native.label
55
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_13_ROIs_1_rh_native.label
56
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_13_ROIs_2_rh_native.label
57
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_13_ROIs_3_rh_native.label
58
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_13_ROIs_4_rh_native.label
59
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_14_ROIs_1_rh_native.label
60
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_14_ROIs_2_rh_native.label
61
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_14_ROIs_3_rh_native.label
62
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_14_ROIs_4_rh_native.label
63
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_14_ROIs_5_rh_native.label
64
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_15_ROIs_1_rh_native.label
65
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_16_ROIs_1_rh_native.label
66
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_16_ROIs_2_rh_native.label
67
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_16_ROIs_3_rh_native.label
68
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_17_ROIs_1_rh_native.label
69
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_17_ROIs_2_rh_native.label
70
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_17_ROIs_3_rh_native.label
71
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_17_ROIs_4_rh_native.label
72
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_18_ROIs_1_rh_native.label
73
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_18_ROIs_2_rh_native.label
74
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_18_ROIs_3_rh_native.label
75
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_18_ROIs_4_rh_native.label
76
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_19_ROIs_1_rh_native.label
77
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_2_ROIs_1_rh_native.label
78
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_2_ROIs_2_rh_native.label
79
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_3_ROIs_1_rh_native.label
80
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_3_ROIs_2_rh_native.label
81
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_3_ROIs_3_rh_native.label
82
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_4_ROIs_1_rh_native.label
83
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_5_ROIs_1_rh_native.label
84
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_5_ROIs_2_rh_native.label
85
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_5_ROIs_3_rh_native.label
86
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_5_ROIs_4_rh_native.label
87
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_6_ROIs_1_rh_native.label
88
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_6_ROIs_2_rh_native.label
89
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_6_ROIs_3_rh_native.label
90
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_7_ROIs_1_rh_native.label
91
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_7_ROIs_2_rh_native.label
92
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_7_ROIs_3_rh_native.label
93
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_8_ROIs_1_rh_native.label
94
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_8_ROIs_2_rh_native.label
95
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_8_ROIs_3_rh_native.label
96
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_8_ROIs_4_rh_native.label
97
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_8_ROIs_5_rh_native.label
98
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_8_ROIs_6_rh_native.label
99
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_9_ROIs_1_rh_native.label
100
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_9_ROIs_2_rh_native.label
101
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_9_ROIs_3_rh_native.label
102
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_9_ROIs_4_rh_native.label
103
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_9_ROIs_5_rh_native.label
104
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels//rh.Net_9_ROIs_6_rh_native.label
7.2.0
cwd /mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels
cmdline mris_label2annot --s sub-DAEK --a yeo2011 --no-unknown --ctab
sub-DAEK_yeoLUT.txt --ldir
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/li2019_labels/
--hemi rh
sysname Linux
hostname LAPTOP-LPS9CH5E
machine x86_64
user bdeck8317
subject sub-DAEK
hemi rh
SUBJECTS_DIR /mnt/c/Users/Ben/freesurfer/subjects
ColorTable sub-DAEK_yeoLUT.txt
AnnotName yeo2011
nlables 54
LabelThresh 0 0.000000
Loading /mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/surf/rh.orig
0 1316060 Net_10_ROIs_1_rh_native
1 14464220 Net_11_ROIs_1_rh_native
2 14423100 Net_12_ROIs_1_rh_native
3 11832480 Net_12_ROIs_2_rh_native
4 9180240 Net_13_ROIs_1_rh_native
5 8204875 Net_13_ROIs_2_rh_native
6 10542100 Net_13_ROIs_3_rh_native
7 9231380 Net_13_ROIs_4_rh_native
8 9221140 Net_14_ROIs_1_rh_native
9 14474380 Net_14_ROIs_2_rh_native
10 2763429 Net_14_ROIs_3_rh_native
11 1351760 Net_14_ROIs_4_rh_native
12 15736992 Net_14_ROIs_5_rh_native
13 6553700 Net_15_ROIs_1_rh_native
14 11146310 Net_16_ROIs_1_rh_native
15 13145750 Net_16_ROIs_2_rh_native
16 3311482 Net_16_ROIs_3_rh_native
17 2146304 Net_17_ROIs_1_rh_native
18 5935475 Net_17_ROIs_2_rh_native
19 681085 Net_17_ROIs_3_rh_native
20 23060 Net_17_ROIs_4_rh_native
21 3957760 Net_18_ROIs_1_rh_native
22 3311482 Net_18_ROIs_2_rh_native
23 1321040 Net_18_ROIs_3_rh_native
24 3276922 Net_18_ROIs_4_rh_native
25 6588260 Net_19_ROIs_1_rh_native
26 3957760 Net_2_ROIs_1_rh_native
27 50372 Net_2_ROIs_2_rh_native
28 2671812 Net_3_ROIs_1_rh_native
29 3957956 Net_3_ROIs_2_rh_native
30 6564036 Net_3_ROIs_3_rh_native
31 3945156 Net_4_ROIs_1_rh_native
32 13127690 Net_5_ROIs_1_rh_native
33 6604880 Net_5_ROIs_2_rh_native
34 2647140 Net_5_ROIs_3_rh_native
35 3937480 Net_5_ROIs_4_rh_native
36 665610 Net_6_ROIs_1_rh_native
37 50372 Net_6_ROIs_2_rh_native
38 706590 Net_6_ROIs_3_rh_native
39 5923840 Net_7_ROIs_1_rh_native
40 6579200 Net_7_ROIs_2_rh_native
41 32768 Net_7_ROIs_3_rh_native
42 25600 Net_8_ROIs_1_rh_native
43 13117500 Net_8_ROIs_2_rh_native
44 6574090 Net_8_ROIs_3_rh_native
45 51200 Net_8_ROIs_4_rh_native
46 8320 Net_8_ROIs_5_rh_native
47 25750 Net_8_ROIs_6_rh_native
48 1336330 Net_9_ROIs_1_rh_native
49 25740 Net_9_ROIs_2_rh_native
50 3983360 Net_9_ROIs_3_rh_native
51 7895160 Net_9_ROIs_4_rh_native
52 6553720 Net_9_ROIs_5_rh_native
53 25700 Net_9_ROIs_6_rh_native
Writing annot to
/mnt/c/Users/Ben/freesurfer/subjects/sub-DAEK/label/rh.yeo2011.annot
The annotation file looks fine, however, I am worried that this
warning may be pointing at a larger issue. Can you advise?
Thanks!
FS: freesurfer-linux-ubuntu18_x86_64-7.2.0-20210721-aa8f76b
OS: WSL2 Ubuntu
--
*Benjamin L. Deck*
/Doctoral Student/
/Applied Cognitive and Brain Sciences/
/Department of Psychological and Brain Sciences/
/Drexel University/
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