External Email - Use Caution        

Hello,

I have attached the log file and the command used is the first line, please let 
me know if you need anything else.

-Colleen
________________________________
From: freesurfer-boun...@nmr.mgh.harvard.edu 
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Zollei, Lilla,Ph.D. 
<lzol...@mgh.harvard.edu>
Sent: Tuesday, April 13, 2021 12:33 PM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Infant Freesurfer exiting without error

Hi Colleen,

 Can you send the exact command that you used and also the log file for more 
information?

Best, Lilla
________________________________
From: freesurfer-boun...@nmr.mgh.harvard.edu 
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of COLLEEN PLETCHER 
<ccpletc...@medicine.wisc.edu>
Sent: Tuesday, April 13, 2021 1:29 PM
To: freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] Infant Freesurfer exiting without error


        External Email - Use Caution

Hi,

I am trying to run infant freesurfer using the --segfile and --masked options. 
When I attempt to run it, it runs for a bit and then I get this:


USAGE: mri_or  <options> fname1 fname2 ..



After this, the program exits. I am not getting any error, so I am confused 
about why it is exiting suddenly?


Thank you very much!


-Colleen

Attachment: sub-10021-segtest_infant_recon_all.2104131047.log
Description: sub-10021-segtest_infant_recon_all.2104131047.log

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