Hi Rosalia

the subject ID specified by -s (001C in your case) has to be unique within a given SUBJECTS_DIR

cheers
Bruce
On Fri, 19 Oct 2018, Rosalia Dacosta Aguayo wrote:


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Dear FreeSurfer team,

I am experiencing an error when trying to run a subject from a different group 
but with the same
number.
I would much appreciate your helping here.
Regards,
Rosalia

rosalia@rosalia-Lenovo-Y520-15IKBN 
~/Desktop/MS_STUDY/subjects_controls/001C/mri $ recon-all -sd
~/Desktop/MS_STUDY/subjects_controls -s 001C -i /home/rosalia/D
esktop/MS_STUDY/subjects_controls/001C/mri/001.nii.gz -autorecon1
ERROR: You are trying to re-run an existing subject with (possibly)
 new input data (-i). If this is truly new input data, you should delete
 the subject folder and re-run, or specify a different subject name.
 If you are just continuing an analysis of an existing subject, then
 omit all -i flags.
rosalia@rosalia-Lenovo-Y520-15IKBN 
~/Desktop/MS_STUDY/subjects_controls/001C/mri $


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