External Email - Use Caution Hi Andrew,
Looks like that cleared the errors. Thank you both, -Eli ________________________________ From: Hoopes, Andrew <ahoo...@mgh.harvard.edu> Sent: Tuesday, July 31, 2018 3:09 PM To: Freesurfer support list Cc: Rockers, Elijah D. Subject: Re: [Freesurfer] Surface editing: recon-all exited with errors Hi Eli, the -make all flag contains a bug in the 6.0 release. This can be fixed if you download this script - https://urldefense.proofpoint.com/v2/url?u=ftp-3A__surfer.nmr.mgh.harvard.edu_pub_dist_freesurfer_dev-5Fbinaries_centos6-5Fx86-5F64_recon-2Dall.makefile&d=DwIGaQ&c=QmPtDiFixEjkMvDKaP3E2Vb9C2z4M0PdarxyAHQ2iDQ&r=xbyrBxm81l6mG_XEX66jgCNTXfK3eVo30T9sVQVTz1Q&m=NdmdZKAguIV8eXD4q6jw5Ub-tV1C8ZYAQonZaC5Moj4&s=OVTOQexQaYiTh7MsmChOewxSfa3PnCfztVjr2RDlnM8&e= - and overwrite the current $FREESURFER_HOME/bin/recon-all.makefile Let me know if you still have issues best, Andrew On 7/31/18, 3:15 PM, "freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Bruce Fischl" <freesurfer-boun...@nmr.mgh.harvard.edu on behalf of fis...@nmr.mgh.harvard.edu> wrote: hmmmm, maybe -make all has changed (or my memory of what it does is incorrect). I'll find someone else here to help you out cheers Bruce On Tue, 31 Jul 2018, Bruce Fischl wrote: > did you run > > recon-all -s <subject name> -make all > > ? > > > I don't see it in the log > On Tue, 31 Jul 2018, Rockers, Elijah D. wrote: > >> >> External Email - Use Caution >> >> Oh, yep, sorry about that. I copy the list on this e-mail, and attach the >> log. I think the list >> blocks attachments, but if anyone wants to see full log I can send it. >> >> >> Thanks to all, >> >> -Eli >> Houston Methodist. Leading Medicine. Houston Methodist is ranked by U.S. News & World Report as the No. 1 hospital in Texas for patient care. Houston Methodist is nationally ranked in 8 specialties and is designated as a Magnet hospital for excellence in nursing. Visit us at houstonmethodist.org. Follow us at twitter.com/MethodistHosp and facebook.com/HoustonMethodist. ***CONFIDENTIALITY NOTICE*** This e-mail is the property of Houston Methodist and/or its relevant affiliates and may contain restricted and privileged material for the sole use of the intended recipient(s). Any review, use, distribution or disclosure by others is strictly prohibited. If you are not the intended recipient (or authorized to receive for the recipient), please contact the sender and delete all copies of the message. Thank you.
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