Hi Michael I believe you can just run the -balabels switch, which should only take a couple of minutes
cheers Bruce On Mon, 15 May 2017, Michael Bannert wrote: > Dear FreeSurfer community, > > I would like to perform a ROI analysis using an anatomical mask. I was > thinking of using the thresholded masks in the annotations file created > from running recon-all. > > Now I noticed that a few of my older datasets do not seem to have > thresholded annotation files, but only the unthresholded ones. > > Is it possible to create these files (e.g., l/rh.BA.tresh.annot) again > without having to run recon-all over again? Maybe from manually > thresholding the unthresholded annotation files (l/rh.BA.annot)? > > How would I go about this? > > Thanks and best, > Michael > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
