Use
mri_binarize --i aseg.mgz --match 17 --binval -1 --o your.lefthippo.nii.gz
On 4/6/17 6:00 AM, Dilip Puri wrote:
Hi everyone,
I am working on Hippocampus segmentation using Neural Networks for
that I need labeled images of Hippocampus corresponding to original
images.
I am using OASIS Dataset for this. I want to generate labeled images
using FREESURFER. Is there any way to label each 3D co-ordinate
HippoCampus -1
Otherwise - 0
Here are sample files link
<https://drive.google.com/drive/folders/0B6rH1c6LupG_b3I4WUJ1RWZCbnM?usp=sharing>
Kindly help me!
Dilip Puri <http://dilippuri.github.io>
IIIT Vadodara <http://www.iiitvadodara.ac.in>
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.