Use
mri_binarize --i aseg.mgz --match 17 --binval -1 --o your.lefthippo.nii.gz
On 4/6/17 6:00 AM, Dilip Puri wrote:
Hi everyone,
I am working on Hippocampus segmentation using Neural Networks for
that I need labeled images of Hippocampus corresponding to original
images.
I am using OASIS Dataset for this. I want to generate labeled images
using FREESURFER. Is there any way to label each 3D co-ordinate
HippoCampus -1
Otherwise - 0
Here are sample files link
<https://drive.google.com/drive/folders/0B6rH1c6LupG_b3I4WUJ1RWZCbnM?usp=sharing>
Kindly help me!
Dilip Puri <http://dilippuri.github.io>
IIIT Vadodara <http://www.iiitvadodara.ac.in>
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