Try typing the full path to the CON_101.nii file On 12/16/2016 02:05 PM, Sadhana Singh wrote: > Hello FreeSurfer Developers, > > I'm running the recon-all on my subjects data as described in freesurfer > tutorial (https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial), but it shows > the following error when I run the recon-all command: > > ERROR: cannot find CON_101.nii > recon-all -s exited with ERRORS > > > I've tried so many times but still shows same errors. Does anyone have any > thoughts on how to trouble-shoot this one? Also, Ive attached the > recon-all.log in case it's of any use. > > 1) FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0 > 2) Platform: Red Hat Enterprise Linux 7 > 3) uname -a: Linux lcmodel 3.10.0-327.el7.x86_64 #1 SMP Thu Oct 29 17:29:29 > EDT 2015 x86_64 x86_64 x86_64 GNU/Linux > 4) recon-all.log: see attached > > > > > > > Regards > /Sadhana Singh, PhD / > /Postdoctoral Researcher > / > // > /Departments of Anesthesiology > / > // > /David Geffen School of Medicine at UCLA / > //// > /University of California at Los Angeles / > // > /Los Angeles, CA, USA/ > // > /Phone No: 424-270-4940 > / > // > /Email: sadhanasi...@mednet.ucla.edu <mailto:sadhanasi...@mednet.ucla.edu> / > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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