Dear Stephen, I would definitely rerun, for the sake of reproducibility. The results are sensitive not only to changes in the subfield module (which I believe I didn’t modify in between your release and the final 6.0), but also to changes in the main FreeSurfer stream. So, your results are different than what you’d get by rerunning everything with the final 6.0 version. Cheers, /Eugenio
Juan Eugenio Iglesias ERC Senior Research Fellow Translational Imaging Group University College London http://www.jeiglesias.com http://cmictig.cs.ucl.ac.uk/ On 7 Feb 2017, at 20:18, Smagula, Stephen Fearns <sf...@pitt.edu<mailto:sf...@pitt.edu>> wrote: Dear Dr. Iglesias, Using the originally released version 6 (the one that was "unreleased") I ran the recon -all -all and the subfield segmentations on a sample. I noticed that the program was taken down then put back online after some updates. Do you recommend we re-run these segmentations with the newly released version? That is, if the segmentation ran with the "old FreeSurfer 6", would you expect there to be any difference with the new release? Thank you, Stephen Smagula Post-doc University of Pittsburgh _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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