Hi Chris, This sounds great! How does it deal with the FreeSurfer license? I know that the FreeSurfer team depends on licenses to keep track of the number of users (a key component to justifying their work when applying for grants). I'm looking forward to trying it out!
Thanks, Dan On Tue, Aug 9, 2016 at 12:37 PM, Chris Filo Gorgolewski <chris.gorgolew...@gmail.com> wrote: > Dear all, > I have created a Docker image with Freesurfer distribution (and all required > dependencies). > > Features: > > Only requires Docker to run (works on Linux, Mac and Windows - does not > suffer from the VirtualBox bug) > understands BIDS formatted datasets > performs recon-all on all subjects > allows you to run each subject independently (and potentially in parallel) > automatically performs longitudinal analysis when multiple sessions are > detected > creates custom group level template for your study > can be easily converted to a Singularity image using docker2singularity tool > and run on your local HPC/cluster > > You can find more information here: https://github.com/BIDS-Apps/freesurfer > > Please let me know what do you think! > > Best, > Chris > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
