Hi Thank you so much for your response. I attached here three files including the command lines, LUT file , and the list of names I want to get and what the result is actually. I'd appreciate if you look at them and let me know what is wrong with that.
Regards, Faezeh Vedaei On Mon, Feb 29, 2016 at 4:45 PM, Faeze Vedaei <faezeved...@gmail.com> wrote: > Hi, > > I checked again to arrange the labels in the order of LUT file, but the > result has not changed. Can you help me more how I can fix this problem? > Thank you so much for your time and help. > > Regards, > Faezeh Vedaei > > On Mon, Feb 29, 2016 at 3:01 PM, Faeze Vedaei <faezeved...@gmail.com> > wrote: > >> Hi, >> >> Thank you for your response. Yes, you are right. The names come from the >> color LUT file. But, the issue is that I chose the label files from that >> LUT file too. It meas the source that I chose the label files from and the >> source of the region's names in tksurfer are the same. The problem is just >> I do not have the label's names I merged to create annot file, in the >> tksurfer GUI. It shows another names of that list! So, what do you think >> about? What is the problem? >> >> Regards, >> Faezeh Vedaei >> >> On Mon, Feb 29, 2016 at 12:42 PM, Faeze Vedaei <faezeved...@gmail.com> >> wrote: >> >>> Hi Freesurfer experts, >>> >>> I have created an annotation file by several label files using >>> mris_label2annot command in Freesurfer. The problem is that when I open >>> this annot file in tksurfer and click on colored regions which corresponded >>> to specific labels I had chosen them, I do not have their name on the >>> vertex information part at the bottom of tksurfer GUI. It shows very >>> different names for these regions. May you explains me what is the problem >>> I could not see the exact region's name as I have them for label files? >>> >>> Thanks, >>> Faezeh Vedaei >>> >> >> >
mris_label2annot.docx
Description: MS-Word 2007 document
LUT file (ctab).xlsx
Description: MS-Excel 2007 spreadsheet
label's name.docx
Description: MS-Word 2007 document
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
