Hi, I am running longitudinal processing with Freesurfer according to the instructions on freesurfer website here: https://surfer.nmr.mgh.harvard.edu/fswiki/LongitudinalStatistics
So in step2, I ran recon-all -base template -tp subPRE/subPRE/mri/norm.mgz -tp subPOST/subPOST/mri/norm.mgz -sd /home/study/sub then the screen output says "recon-all -s template finished without error" [note, after this, a folder called "Template" was created in my subject directory "/home/study/sub", but actually I do not see any MRI data in there, the total size of this folder is only 336.8KB] then I ran Step 3 as written in the instruction: recon-all -long subPRE template -all -sd /home/study/sub and it gave me an error: "file /home/study/sub/template/base-tps does not exist!" which is true since I indeed cannot find this file, but what was the problem in this process? and what shall I do to solve this problem? Thanks a lot!!! -Diane
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