I have feared that. Sorry for asking, but do you have an atlas in mind for my purpose?
Cheers Andre ________________________________________ Von: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.harvard.edu]" im Auftrag von "Bruce Fischl [fis...@nmr.mgh.harvard.edu] Gesendet: Mittwoch, 15. April 2015 19:04 An: Freesurfer support list Betreff: Re: [Freesurfer] midbrain mask oh, if you have no anatomical images then we can't help you Bruce On Wed, 15 Apr 2015, André Schmidt wrote: > Thanks Bruce. I'll try this. > > The problem is I have no anatomical images for my subjects. What can I use as > input volume in mri_extract_label? > > I want use this mask to extract time series afterwards. > > Thanks again. > > Best wishes > Andre > > ________________________________________ > Von: freesurfer-boun...@nmr.mgh.harvard.edu > [freesurfer-boun...@nmr.mgh.harvard.edu]" im Auftrag von "Bruce > Fischl [fis...@nmr.mgh.harvard.edu] > Gesendet: Mittwoch, 15. April 2015 18:18 > An: Freesurfer support list > Betreff: Re: [Freesurfer] midbrain mask > > p.s. sorry, maybe not brainstem, maybe "ventral diencephalon" > On Wed, 15 > Apr 2015, André Schmidt wrote: > >> Dear FS experts, >> Can you please guide me how to create a binary mask of the left midbrain >> (VTA, SN)? >> >> Thanks for your help >> Andre >> >> > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
