Hi all,
I'm super new to Freesurfer. I just set it up on my computer earlier
today, following the official wiki on harvard.edu/fswiki...
My system:
- Ubuntu 14.04 LTS (up to date)
- Tcsh installed
- Freesurfer version:
freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0.tar.gz
<ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/5.3.0/freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0.tar.gz>
- Mathlab not installed
Sourcing the SetUpFreeSurfer.csh(sh) script worked fine and license.txt
is in $FREESURFER_HOME.
When trying to pull and view the sample data by entering the below in
the terminal (tcsh)
freeview -v $SUBJECTS_DIR/bert/mri/brainmask.mgz -v
$SUBJECTS_DIR/bert/mri/aseg.mgz:colormap=lut:opacity=0.2 -f
$SUBJECTS_DIR/bert/surf/lh.white:edgecolor=yellow -f
$SUBJECTS_DIR/bert/surf/rh.white:edgecolor=yellow -f
$SUBJECTS_DIR/bert/surf/lh.pial:annot=aparc:edgecolor=red -f
$SUBJECTS_DIR/bert/surf/rh.pial:annot=aparc:edgecolor=red
I'm getting the following error message*
**
**freeview.bin: error while loading shared libraries:
libvtkverdict.so.5.6: cannot open shared object file: No such file or
directory*
I was searching for the missing file in Aptitude and on the internet,
but couldn't manage to find it.
Any suggestions how to proceed from here?
Thanks and best wishes!
Johannes
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