g466_qMRI_R1.nii.gz <https://docs.google.com/file/d/0B_UcVoCKdFenTkh6SUU4MVpxYjA/edit?usp=drive_web> Dear Ruopeng, I just had to make sure about data rights issues before sending you the image. No problem there.
I have attached the nifti file that I used. There were some attachment size issues, please let me know if you cannot access the file. Thank you for looking into this! Kind regards, Pernille On Mon, Feb 2, 2015 at 3:47 PM, Ruopeng Wang <rpw...@nmr.mgh.harvard.edu> wrote: > Would it be possible to send us an image file that you had problem with? > > Best, > Ruopeng > > On Feb 2, 2015, at 7:38 AM, Pernille Iversen <pern...@drcmr.dk> wrote: > > > Dear Freesurfer team, > > We calculate our T1 images from quantitative sequences. I have tried to > process one of these images with the FS pipeline and it finishes apparently > without errors. However, when I try to load any of the .mgz files in > Freeview, the images appears as a white box. Changing the slider settings > for opacity, window, level, min or max does not help. The only way I can > get a hint of a brain (including a lot of noise) is to change color map to > colorlut, so maybe Freeview has problems with showing these images. > > > > Any suggestions how to proceed? Are there any special settings I need > for the image generation? > > > > Thanks in advance. > > > > Pernille > > > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > -- Pernille Iversen, PhD Manager of Reader Centre Danish Research Centre for Magnetic resonance Center for Functional and Diagnostic Imaging and Research MR-department, 714 Kettegaard Allé 30 tel: 00 45 3862 6205 Hvidovre Hospital fax: 00 45 3862 1620 2650 Hvidovre mail: pern...@drcmr.dk Denmark www: www.drcmr.dk/ www.cimbi.dk
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