I looked for that file and did not see a BI22_SurferOutput folder at all. ________________________________________ From: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Bruce Fischl [fis...@nmr.mgh.harvard.edu] Sent: Thursday, January 08, 2015 2:34 PM To: Freesurfer support list Subject: Re: [Freesurfer] recon-all error
Hi Mia can you send us the recon-all.log? I don't think you included the error message in your email so there isn't much for us to go on. thanks Bruce On Thu, 8 Jan 2015, Borzello, Mia wrote: > > Hi Freesurfers, > > I'm wondering if you can help with the following error that occurred when > trying to create a reconstruction: > > FREESURFER_HOME: /usr/local/freesurfer/stable5_3_0 > > Build stamp: freesurfer-Linux-centos6_x86_64-stable-v5.3.0-20130514 > > RedHat release: CentOS release 6.5 (Final) > > Kernel info: Linux 2.6.32-431.20.3.el6.x86_64 x86_64 > > NMR Center info (/space/freesurfer exists): > > machine: huygens > > SUBJECTS_DIR: /autofs/space/huygens_001/users/mia/subjects > > PWD: /autofs/space/huygens_001/users/mia/subjects > > ssh huygens > setenv SUBJECTS_DIR /autofs/space/huygens_001/users/mia/subjects > cd /autofs/space/huygens_001/users/mia/subjects > > > 1)BI22 > 2)recon-all -autorecon1 -autorecon2 - autoreon3 -subject BI22_SurferOutput > -i/autofs/space/huygens_001/users/mia/subjects/BI22_PreOp_MRI/DICOM_BI19/4571 > /4571157.dcm > 3)recon-all -s exited with ERRORS at Thu Jan 8 13:08:33 EST 2015 > > > Thanks, > m > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
