Hi Mia
can you send us the recon-all.log? I don't think you included the error
message in your email so there isn't much for us to go on.
thanks
Bruce
On Thu, 8 Jan 2015, Borzello, Mia wrote:
Hi Freesurfers,
I'm wondering if you can help with the following error that occurred when
trying to create a reconstruction:
FREESURFER_HOME: /usr/local/freesurfer/stable5_3_0
Build stamp: freesurfer-Linux-centos6_x86_64-stable-v5.3.0-20130514
RedHat release: CentOS release 6.5 (Final)
Kernel info: Linux 2.6.32-431.20.3.el6.x86_64 x86_64
NMR Center info (/space/freesurfer exists):
machine: huygens
SUBJECTS_DIR: /autofs/space/huygens_001/users/mia/subjects
PWD: /autofs/space/huygens_001/users/mia/subjects
ssh huygens
setenv SUBJECTS_DIR /autofs/space/huygens_001/users/mia/subjects
cd /autofs/space/huygens_001/users/mia/subjects
1)BI22
2)recon-all -autorecon1 -autorecon2 - autoreon3 -subject BI22_SurferOutput
-i/autofs/space/huygens_001/users/mia/subjects/BI22_PreOp_MRI/DICOM_BI19/4571
/4571157.dcm
3)recon-all -s exited with ERRORS at Thu Jan 8 13:08:33 EST 2015
Thanks,
m
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