hi, I have tried to make prefrotnal cortex label by doing first
mri_annotation2label --subject "$subject" --hemi rh --outdir "$subject"/label mri_mergelabels -i lh.caudalanteriorcingulate.label -i lh.caudalmiddlefrontal.label -i lh.lateralorbitofrontal.label -i lh.medialorbitofrontal.label -i lh.parsopercularis.label -i lh.parsorbitalis.label -i lh.parstriangularis.label -i lh.rostralanteriorcingulate.label -i lh.rostralmiddlefrontal.label -i lh.superiorfrontal.label -i lh.lateralorbitofrontal.label -o lh.prefrontalcortex.label -d /directory/subject/label which does create a label called x.prefrontalcortex.label in each persons directory. then however when i try to do mris_anatomical_stats -l $SUBJECTS_DIR/"$subject"/label/lh.prefrontalcortex.label "$subject" lh pial | grep "thickness" >> left_prefrontal i get error and say it cant find label. any pointers on what im doing wrong? thank you
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