Hello FreeSurfer Experts,
I am trying to run QDEC for a group comparison study. I am following the
tutorial found on
http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QdecGroupAnalysis_freeview
However, when I try to load my data table it returns the error.
----------------------------------------------------
Loading data table /home/pcopy_project/qdec/qdec.table.dat...
Number of columns: 5
fsid column: 1
Number of factors: 4
Number of subjects: 57
Reading discrete factor levels from config file
/home/pcopy_project/qdec/gender.levels
Female
Male
done.
Reading discrete factor levels from config file
/home/pcopy_project/qdec/diagnosis.levels
Control
Disease
done.
ERROR: Subject SIYA_001 has an invalid level 'Male' in the gender column
INFO: If 'gender' is a discrete factor, then create a file
named 'gender.levels' containing the valid factor names
one per line.
Error loading the data table.
--------------------------------------------------------
As you see I have a 'gender.levels' file in the same directory as the data
file and it reads it above. I still get the error.
I am new to QDEC and any help would be appreciated.
Thank you
Mohammed Goryawala, PhD
Research Associate
Department of Radiology
University of Miami Miller School of Medicine
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