Hi Tina Did you try visualizing it in tksurfer? Bruce
On May 29, 2013, at 7:22 PM, Tina Jeon <tina.j...@utsouthwestern.edu> wrote: > Hello freesurfers, > > I am trying to create a figure similar to the Hagmann et al 2008 paper with > 998 rois overlaid onto the surface, however, I am finding that there is no > random, unique color for each parcellation unit like described in the help > file for mris_divide_parcellation. > > I have attached a snapshot of my annotation file overlaid onto the surface, > as you can see, the color iterates the same/similar color for a particular > label. Can you tell me what I am doing wrong? Is there a pre-existing atlas > as described in the Hagmann paper? > > My input: > mris_ca_label –t ./FreeSurferColorLUT.txt subject_name lh ./lh.sphere.reg > $FREESURFER_HOME/average/lh.curvature.buckner40.filled.desikan_killany.2010-03-25.gcs > ./lh.aparc.998rois.annot > > mris_divide_parcellation subject_name lh ./lh.aparc.998rois.annot > ./splittable.txt ./lh.annotation.998rois_26.annot > > > Many thanks, > > Tina Jeon, MS > UT Southwestern Medical Center ‘14 > > > > UT Southwestern Medical Center > The future of medicine, today. > <neonate_buckner40_atlas.png> > <splittable.txt> > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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