Hi Johnson have you tried using bbregister for this? It should give you a register.dat that you can use with mri_vol2vol to transform your diffusion data into aparc+aseg space if you want.
cheers Bruce On Mon, 19 Mar 2012, Johnson wrote: > Hi > This is Johnson, I am researcher at univ. of IL at chicago, I have a question > regarding freesurfer: > What is the transformation matrix that relates the freesurfer aparc+aseg > space to the aparc+aseg-in-rawavg space, > I am asking this question for the following reason: > I have white matter fiber tracts in Diffusion space, I managed to transform > it to aparc+aseg-in-rawavg space by registering the B0 to the > brainmask-in-rawavg volume. Now I want to transform it to aparc+aseg space. > thanks > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
