probably not, as the aseg.stats calculation uses partial volume
estimates.
cheers
Bruce
On Wed, 30 Nov 2011, Joshua Lee wrote:
Hey Doug, THanks. That looks simpler. I'll probably use that.
Question: Will the total volume of a ROI taken from aseg.mgz correspond to
the volume given in aseg.stats?
Josh
On Wed, Nov 30, 2011 at 9:55 AM, Douglas N Greve <gr...@nmr.mgh.harvard.edu>
wrote:
If you have matlab, you can load the aseg into matlab, like
aseg = MRIread('aseg.mgz');
vol = length(aseg.vol(:,:,n:256) == ID);
where ID is the code number for the ROI you want as found in
$FREESURFER_HOME/FreeSurferColorLUT.txt
doug
Joshua Lee wrote:
Hi All,
I would like to determine the volumes of a segmented region
below or above an arbitrary line in one of the planes. For
example, what would be the remaining volume of a label when z >=
nth slice, where I would have previously determined the
appropriate value of n.
Thanks,
Josh
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