Hi Antonella,
usually we run everything then go back and check. I'll leave 1) for Nick
and Krish.
cheers
Bruce
On Mon, 11 Jul 2011, Antonella Kis wrote:
Hi Bruce,
I
1). My LNX3 the only one which is working is a Fedora Linux, Kernel Linux
2.6.32.23-170.fc12.x86_64, GENOME 2.28.2
LNX2 where I get the weird surface display is a Linux CENTOS x86_64, GENOME
2.16.0
The Analyst computer where I got the multiple frames error is a Linux, Kernel
Linux 2.6.35.13-91.fc14.x86_64, GENOME 2.32.0
2). Also, when I am doing my data analysis after running the recon -all and
qcache -all for my subjects, what is the best steps order to be followed. While
reading the
FreeSurfer Troubleshooting Reconstruction Work suggests the user to run all
these steps at once before beginning to inspect the data since this allows the
user to see the
final complete output before deciding on any interventions.But this steps are
in a different order that the one in the tutorial and also in a different order
that the one
described in the attached document.
8. Check the segmentations
- After editing the wm.mgz volume run the following steps: -normalization
-maskbfs -segmentation -autorecon2-wm -autorecon3.
Thank you for your help!
Antonella
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